Moraxella bovoculi: AAX09_00565
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Entry
AAX09_00565 CDS
T04324
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbl
Moraxella bovoculi
Pathway
mbl03030
DNA replication
mbl03410
Base excision repair
mbl03420
Nucleotide excision repair
mbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAX09_00565 (ligA)
03410 Base excision repair
AAX09_00565 (ligA)
03420 Nucleotide excision repair
AAX09_00565 (ligA)
03430 Mismatch repair
AAX09_00565 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbl03032
]
AAX09_00565 (ligA)
03400 DNA repair and recombination proteins [BR:
mbl03400
]
AAX09_00565 (ligA)
Enzymes [BR:
mbl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AAX09_00565 (ligA)
DNA replication proteins [BR:
mbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAX09_00565 (ligA)
DNA repair and recombination proteins [BR:
mbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AAX09_00565 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAX09_00565 (ligA)
MMR (mismatch excision repair)
DNA ligase
AAX09_00565 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAX09_00565 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
DNA_ligase_ZBD
BRCT
HHH
PTCB-BRCT
HHH_3
5_3_exonuc
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AKG18157
LinkDB
All DBs
Position
123709..125781
Genome browser
AA seq
690 aa
AA seq
DB search
MTDLFDFTQEDLVANPKDDHIVGQMRNLIQALKKHNHAYYVLDNPTIADDEYDSLRSKLV
QLEQAHPNLKQPDSPTDSVGGEPLPAFNQVAHDLAMLSLGNVFDEEELLSFVRRINDRLD
DKNKQPEFEMELKLDGLAVSLKYMNGVFTQAITRGDGRLGEDITHNVRTIRNLPLVLPEC
VDIDLLEVRGEVLMPKAGFMKFNKDSELRGEKTFANPRNAAAGSLRQLNPAIAAARPLAF
FGYSVNQGLPSHITTQSGALEYLRTLGFETAPFDTATTPKGVQEFYDNIANARDQLPFEI
DGVVIKVNSLALQNDLGFLSREPRWATAYKFAAQNAITRLLTVEWQVGRTGQLTPVGKLE
PVNVGGVTVSNVTLHNFGEIQRLGVMVGDMVSIHRAGDVIPKVSGVMMELRDENVSSITL
PETCPVCDSHVSLPEGEALARCTGGLYCPAQSKEALIHFVSRRAMDIDGLGGQWLIKFFE
MNLIKTVADIYTLKDHQEHLMTLEGLGEKSVANMLSAIETSKNTTLPRFIFALGIRGVGE
TTAQNLAESFESFDALRQASAEQLLHVPDIGDITAVNIMEFFQSEHNNEVIDGLINAGIH
WGAVTKNTGDAPLDGQTWVVTGTLSAMGRDEAKAHLQALGAKVLGSVSAKTSMLLAGEKA
GSKLDKAQSLGVQVMDEATFMALLTEHGRA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttatttgattttacccaagaggatttagtagccaaccccaaagatgatcac
atcgttggccaaatgcgtaatctgattcaagcgctaaaaaaacacaatcacgcctattat
gtgcttgataacccaaccatcgctgatgatgagtacgacagtctaagatctaagttggtt
cagcttgaacaagcgcatcccaatttaaaacaacctgacagcccgaccgacagcgtgggc
ggtgagccgctacctgcttttaatcaagtggcgcatgatttggcgatgctctccttggga
aatgtgttcgatgaagaagagctattaagcttcgttcgccgtatcaatgaccgccttgat
gataaaaataagcagccagaatttgagatggagcttaagctggacggtttggcagtatcc
ttaaaatacatgaatggcgtatttactcaagccatcacgcgtggcgatggtcgcttgggt
gaggatattacgcataatgtcagaaccatccgcaacttaccgttggtgctaccagagtgt
gtcgatattgatttattggaagtgcgcggcgaggtgctcatgccaaaagcgggctttatg
aagtttaataaagacagtgaactgcgtggtgagaagacttttgccaatcctagaaatgcc
gccgcgggcagtctgcgccaacttaatcctgccattgcagcagcacgacctttggcgttt
tttgggtattcagtgaatcagggtttgccaagtcacatcacgacccaaagtggtgcattg
gaatatctgcgcacgttaggatttgagactgcgccttttgatactgcaaccacccctaag
ggtgtgcaggaattttatgataatatcgccaatgcacgcgatcagctgccctttgagatt
gatggggtggtaatcaaggtgaattcgttagcgctgcagaatgatttggggtttttgagc
cgcgaaccgagatgggcgacggcttataaatttgccgcccagaatgccatcacgcgtctt
ttgacggtagagtggcaagtagggcgtacaggacagctgacccctgtgggtaaattggag
cctgttaatgtcggtggggtgacggtcagtaacgtgacgctgcataattttggtgagatt
cagcggcttggcgttatggttggcgacatggtgagcatccaccgcgctggtgatgttatt
ccgaaagtctcgggagtgatgatggagctgcgtgatgagaatgtcagctcgatcacacta
ccagagacttgccctgtgtgtgattctcatgtctccttgcccgagggtgaggcgctggct
cgctgcacgggcggattgtattgccctgctcagtctaaggaggcactgattcactttgtg
tcgcgccgcgcgatggatattgatggcttgggtgggcaatggctgatcaagttctttgag
atgaatctgatcaagacagttgctgacatttatactctaaaagaccatcaagaacatctg
atgaccttggagggtctcggcgaaaaatctgttgccaatatgctgtccgccattgaaaca
tccaaaaacacaaccctgccaagatttatctttgcactaggtattcgtggggtgggtgag
accactgcgcagaatttggcagagagttttgagagttttgatgcattaagacaagcaagt
gccgagcagctgcttcatgtgccagacattggcgacatcacggcggttaatatcatggag
ttcttccaaagtgagcataacaatgaagtcatcgacggcttgattaatgctggcatccat
tggggtgcagtgacaaaaaacacaggcgatgcaccattagatgggcagacttgggtggtg
actggcacactatcagcgatggggcgagatgaagccaaggcgcatctacaggcattgggc
gcaaaagtcttaggatcagtatctgccaaaaccagcatgctattggcaggcgaaaaggca
ggctccaagcttgataaagcgcaaagcttaggcgtgcaagtgatggatgaggcgacattt
atggcactattgacagagcatgggcgagcttaa
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