Mycoplasma bradburyae: NMG68_03710
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Entry
NMG68_03710 CDS
T09431
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbra
Mycoplasma bradburyae
Pathway
mbra03030
DNA replication
mbra03410
Base excision repair
mbra03420
Nucleotide excision repair
mbra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMG68_03710 (ligA)
03410 Base excision repair
NMG68_03710 (ligA)
03420 Nucleotide excision repair
NMG68_03710 (ligA)
03430 Mismatch repair
NMG68_03710 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbra03032
]
NMG68_03710 (ligA)
03400 DNA repair and recombination proteins [BR:
mbra03400
]
NMG68_03710 (ligA)
Enzymes [BR:
mbra01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMG68_03710 (ligA)
DNA replication proteins [BR:
mbra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMG68_03710 (ligA)
DNA repair and recombination proteins [BR:
mbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMG68_03710 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMG68_03710 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMG68_03710 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMG68_03710 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTS70104
LinkDB
All DBs
Position
complement(938665..940809)
Genome browser
AA seq
714 aa
AA seq
DB search
MNNSEKDKIYSAIQDLVKKLNKWEHEYYVLSNPSVSDEVYDNAYKTLKEYESKYPEFILS
YSPTQRIGSSISNKFTKVKHDYLMLSLNNCFNFDELINFNDNIAKISKSEKNSYVLEPKI
DGLSISLIYENGLLIDALTRGDGVIGESVFSNIKTIKTIPLKIDTDIKKLVIRGEVYVSN
KDFEEINSSRDEDKKFANSRNYASGSLRNIDVTEVAKRKLNAFFYYIPNSYEVGFKTQYE
VIEKLKKWGFNVAKEIKLFNDIKDVYESIKDLEKNKNNLDYRIDGAVIKYNNFEDYEKIG
YTSKFPKWAIAYKFTPTQVETKLKNIILNVGRTGKLTFVAELEPVELEGSIITYATLHNI
EYINELDIRVNDYVYLIKAAEIIPKVIGVNFDKRKDNCVKFEYDFKCPSCKSDLAKKEEE
VDWYCINDECSQKQLQYLIYYCSKPIMNIEGLSESTLEVFFNTKVNDVIKECNELIANQN
VNEDVQPFELLENDNQTFISNILDIYKLEKYKEIIIKPWLKKGFKKSGIKHNFRFQEKSF
DKLINNINESKNRELYRLLAALNIKFIGVATAKSIASAYNDIDKLRNLTVEDYTRLADIS
NITANSIHSFFSSDKNLELIEKLKELNINTKDEINNELVDESSIYFGKKIVITGSFSISR
NEIIKKLSLKYKIKFVNNVSKNVDYLLAGNKPTAKKINEAKELNIPIIQEEIWN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtgaaaaagataaaatatattcagcaattcaggatttagttaaaaaactg
aataaatgagaacatgagtactatgtgttatctaatccttctgtttctgacgaagtttat
gacaacgcatacaagactttaaaagaatacgaaagtaagtatcctgaatttatattaagt
tattctccgacccagagaataggttcatcaatcagcaataaattcactaaagttaaacat
gattatctaatgctttcactaaataactgctttaattttgatgagttaataaattttaat
gacaacattgctaagattagtaaaagtgaaaaaaattcatatgttttagaacctaaaata
gatggtttatctatttcgttaatttatgaaaatggtttattgatagatgctttaactaga
ggtgatggtgtgattggtgaaagtgttttttcgaatattaaaactattaaaacgattcct
ctaaaaattgataccgatatcaaaaaacttgttattcgcggtgaagtttatgtttcaaat
aaagattttgaagaaataaactcatcaagagatgaagataagaaattcgctaattctaga
aattatgcttctggaagtttaagaaatatcgatgttactgaagttgctaaacgaaaactt
aacgcatttttttattacattcctaactcttatgaagttggttttaaaactcaatacgag
gtaattgaaaaattaaaaaaatgaggctttaatgtagccaaagaaattaaattatttaac
gacataaaagatgtttatgaaagtattaaagatcttgaaaaaaataaaaataatttagat
tacagaattgatggagctgttataaaatacaacaacttcgaagattatgaaaaaattggt
tatacttcgaaatttcctaaatgagcaattgcttataaatttactccaacacaagttgaa
actaaattaaaaaacattatcttaaatgtaggaagaactggtaagttaacttttgttgct
gaacttgagcctgtagagttagaaggctcaattattacatatgcaaccttacataatatt
gagtacattaatgagctagatattagagttaacgattatgtttatttaataaaagctgcc
gaaattattccgaaagtaattggagttaatttcgataaaagaaaagataattgtgtcaaa
tttgaatatgacttcaaatgtcctagttgtaaatctgatttagctaaaaaagaagaagaa
gtcgactgatattgtattaatgatgaatgtagtcaaaaacaacttcaatacctaatttat
tattgttctaaaccaataatgaatattgaaggtttaagtgaaagtacattagaagttttt
tttaacactaaagttaacgatgttattaaagaatgtaatgaattgatagctaatcaaaat
gtaaacgaagatgttcagccatttgaattacttgaaaacgataatcaaacatttatttca
aatatcttggatatttataaactagaaaaatataaagaaattattattaagccttgactt
aaaaaaggatttaaaaaatcaggaatcaaacataactttagatttcaagagaaatcattc
gacaaattaattaataacattaatgagtctaaaaatagagaactttatcgtttgttagct
gctttaaatattaaatttatcggcgttgctactgctaaatcaattgctagcgcatataat
gatatagataagttaagaaatctaactgtggaagattatactagattggctgatataagt
aatattactgcgaattcgatacatagctttttttcatctgataaaaacttagaattaatt
gaaaaattaaaagaactgaatattaatacaaaagatgaaatcaacaatgaattagtggat
gaatcatcaatttattttggtaaaaaaattgtcataactggttcatttagcatttctaga
aatgaaataattaaaaaattatctctaaaatataaaattaaatttgtaaataatgtctct
aaaaatgttgattatctgttagctggcaataagcctactgctaaaaaaattaacgaagct
aaagaattaaatataccaataatacaagaagagatttggaactaa
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