Mycobacterium burgundiense: MU0053_003285
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Entry
MU0053_003285 CDS
T10823
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbug Mycobacterium burgundiense
Pathway
mbug03030
DNA replication
mbug03410
Base excision repair
mbug03420
Nucleotide excision repair
mbug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MU0053_003285 (ligA)
03410 Base excision repair
MU0053_003285 (ligA)
03420 Nucleotide excision repair
MU0053_003285 (ligA)
03430 Mismatch repair
MU0053_003285 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbug03032
]
MU0053_003285 (ligA)
03400 DNA repair and recombination proteins [BR:
mbug03400
]
MU0053_003285 (ligA)
Enzymes [BR:
mbug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MU0053_003285 (ligA)
DNA replication proteins [BR:
mbug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MU0053_003285 (ligA)
DNA repair and recombination proteins [BR:
mbug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MU0053_003285 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MU0053_003285 (ligA)
MMR (mismatch excision repair)
DNA ligase
MU0053_003285 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MU0053_003285 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
HHH_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAJ1506764
UniProt:
A0ABN9NIA8
LinkDB
All DBs
Position
1:complement(3497819..3499945)
Genome browser
AA seq
708 aa
AA seq
DB search
MVSPADPDAGDAVEAAPKEADLRREWQDLADEVREHQFRYYVRDAPTISDGEFDALLGRL
IALEEQHPELRTPDSPTQLVGGAGFATEFAPAAHLERMLSLDNVFNVEELAAWTARLRAE
IGADQHYLCELKIDGVALSLVYRDGRLERGATRGDGRTGEDVTMNARTIDDIPTRLSATD
DYPVPAVLEVRGEVFFRIADFEALNASLVAEGKPPFANPRNSAAGSLRQKNPAVTSKRKL
RMICHGLGHVEGFTPASLHDAYLALAAWGLPVSEHTARVQGLAAVEERIAYWGEHRHDVE
HEIDGVVVKVDDVSLQRRLGSTSRAPRWAIAYKYPPEEATTKLLDIKVNVGRTGRVTPFA
YMEPVKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGTERE
FVMPTTCPECGSPLAPAKEGDADIRCPNSRSCPAQLRERLFHLAGRGAFDIEALGEKAAT
ALLTSGVLADEGDLFTLTAEDLLRTELFTTQKGELSKNGELLLNNLDKAKAQPLWRVLVA
LSIRHVGPTAARALAGEFGTLEQIEAATEEELAAVEGVGPTIAAAVVEWFTVDWHRAIVD
KWRAAGVRMADERDTSIARTLEGLSIVVTGSLPGFSRDEAKEAILARGGKAAGSVSKKTA
YVVAGDAPGSKYDKAVELGVPILDEDGFRRLLAHGPGSDGSEPPDNGE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcccagctgaccccgatgccggagacgccgtggaggcggctccgaaagaagcc
gatctgcgtcgcgaatggcaggacctcgccgacgaggtgcgcgagcaccagttccgctac
tacgtccgcgacgcgccgacgatttccgacggcgagttcgacgcgctgctgggccggctg
atcgccctcgaggagcagcaccccgaactgcgcaccccggattcgccgacccagctggtc
ggcggcgcgggattcgcgaccgagttcgcgccggccgcgcatctcgagcggatgctcagc
ctcgacaacgtcttcaacgtcgaggagctggccgcctggaccgcccggctgcgggccgag
atcggcgcggaccagcactacctgtgcgaactcaagatcgacggcgtggcgctgtcgctg
gtctaccgcgacggccggctcgagcgcggcgccacccgcggtgacgggcgcaccggcgag
gacgtgaccatgaacgcccgcaccatcgacgacatcccgacgcggttgtccgccaccgac
gactacccggtgcccgcggtgctcgaggtgcgcggcgaggtgttcttccgcatcgccgat
ttcgaagcgctcaacgccagcctggtggccgagggcaaaccgccgttcgccaacccgcgc
aacagtgccgccgggtcgttgcggcagaagaaccccgcggtgacctcgaagcgcaagttg
cggatgatctgccacggcctcggacacgtcgagggtttcactccggcctccctgcacgac
gcctacctcgcgctcgctgcctggggactgccggtctccgagcacaccgcgcgggtgcag
gggttggccgcggtcgaggagcgcatcgcctattggggcgagcatcgccacgacgtcgag
catgagatcgacggcgtggtggtcaaggtcgacgatgtttcgctgcagcgccggctcggg
tccacctcgcgggcgccgcgctgggcgatcgcctacaagtatccgcccgaggaggccacc
accaagctgctcgacatcaaggtcaatgtcgggcggaccgggcgggtcaccccgttcgcc
tacatggaaccggtgaaggtggccggttcgacggtcgggctggcgaccctgcacaacgcc
tcggaggtcaagcgcaagggggtgctgatcggggacaccgtcgtcatccgcaaggccggc
gatgtcatccccgaggtgctcggacccgtggtcgacctgcgggacggcaccgagcgcgaa
ttcgtcatgccgacaacgtgtccggagtgcggtagcccgttggcgcccgccaaggagggc
gacgccgacatccggtgccccaactcgcgcagttgccccgcgcaactgcgcgaacggttg
ttccacctggctggtcgcggtgccttcgacatcgaggcgttgggggagaaggcagccacc
gcgttgttgacctcgggggtcctggccgacgagggcgacctgttcaccctcaccgccgag
gacctgttgcgcaccgagttgttcacgacgcagaagggcgaactgtcgaagaacggcgag
ctgctgctgaacaacctcgacaaggccaaggcccagccgctgtggcgggtcctggtggcg
ctgtcgatccgccatgtcggccccacggcggcgcgcgccctggccggagaattcggcacg
ctggagcaaatcgaggccgccaccgaggaggagttggccgccgtcgagggcgtgggtccg
accatcgccgcggcggtcgtcgagtggttcaccgtcgattggcatcgcgcgatcgtcgac
aagtggcgcgcggccggcgtccggatggccgacgagcgcgacaccagcatcgcgcggacc
ctggagggcctgtcgatcgtggtgaccggttcactgccgggcttctcgcgcgacgaggcc
aaggaggcgatcctggcacgcggcggcaaggccgccggttcggtgtcgaagaagaccgcc
tacgtggtcgccggcgatgcccccgggtccaaatacgacaaggccgtcgagctcggcgtg
ccgattctcgacgaggacggctttcgccggttgctggcgcacgggcccggatccgatggc
tcggagccgcccgacaacggcgaatag
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