Methanosarcina barkeri MS: MSBRM_1355
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Entry
MSBRM_1355 CDS
T03838
Name
(GenBank) Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (small subunit)
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00300
Lysine biosynthesis
mby00680
Methane metabolism
mby01100
Metabolic pathways
mby01110
Biosynthesis of secondary metabolites
mby01120
Microbial metabolism in diverse environments
mby01210
2-Oxocarboxylic acid metabolism
mby01230
Biosynthesis of amino acids
mby01240
Biosynthesis of cofactors
Module
mby_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MSBRM_1355
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSBRM_1355
Enzymes [BR:
mby01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
MSBRM_1355
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GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AKB54353
UniProt:
A0A0E3QTQ5
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All DBs
Position
1793807..1794316
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AA seq
169 aa
AA seq
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MSLIIGRVWKYGNNINTDEIIPGKYLRSKDIQIFAAHAMEGIDPEFTKKFRFGDIIVAGT
NFGCGSSREQAPLALKYAGVSCVIAKSFARIFFRNAINIGLPLIEVDIECQEGDKVKVDL
AKGEVIVSDKDTFRGNKLPDFLLEILNDGGLVAHRKKLQRKKNKTIIPG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgattataggccgggtctggaaatacggaaacaacattaatactgatgaaata
atcccgggtaagtatttgcggagcaaagatatacagatctttgcagctcatgcaatggag
ggaattgacccggaattcacaaaaaagttcaggtttggagatatcattgttgcaggcact
aacttcggctgtgggtcttcaagagagcaggctcctcttgccttgaaatatgcaggagtg
tcatgtgttatagcaaagtcttttgcaaggatctttttcagaaatgcaatcaatatcggg
ctacctctcatagaagttgatattgaatgccaggaaggagataaagttaaagttgatctg
gccaaaggtgaagttatagtctcagacaaagacacattcaggggaaataaactgccggat
ttccttcttgagatactcaacgatggtggacttgtagctcatagaaaaaaactccagaga
aagaaaaacaaaacaattataccaggttaa
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