Mytilus californianus (California mussel): 127730730
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Entry
127730730 CDS
T08804
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127730730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127730730
Spliceosome [BR:
mcaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127730730
Complex C
U5 SnRNP specific factors
127730730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
Roc
TAF4
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127730730
NCBI-ProteinID:
XP_052095208
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MDQELYDEFGNYIGPELDSDEEDEDAEEDKNREDAMAEYAGEDDDDDMDADEADDAAEMQ
VVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIAPVKKKKFTMAEQDLPDTVYNM
EFLADLMDSPDLIRNITLCGHLHHGKTSFVDCLMLQTHPEMQVNDEKDLRYSDILFTEQE
RGVSIKSTPITLVLPDTRNKSYLVNMFDTPGHVNFSDEVTAAFRLSDGAVIFVDAAEGVM
LNTERLIKHAVQERLPITVCINKVDRLILELKLPPTDAYYKLRHILEEINSLISVYSEED
EGQVISPVLGNVCFASSYFRFCFTLGSFAKIYSDTYGGINEKEFARRLWGDIYFNGATRK
FTKKPQTGSAQRSFVEFILEPLYKIFAQVVGDVDDCLPRVCDELGIALTKEERKLNIRPL
MRLVWQRFFGDFTGFVDMIVEHIKSPMTNAQTKIEHMYTGPSDSDLAELMAQCDPEGPLM
IHTTKLYPTQDATSFHVFGRVISGTLHSNQEVRILGENYSLQDEEDSRFGQVGRLWVSEA
RYKVEVNRVPAGNWILIEGIDQPIVKTSTITDVSSNEEVYIFRPLKFNTNSVIKIAVEPV
NPSELPKMLDGLRKVNKSYPLLNTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLEKGLAEDIENEVVQITWPRKRLG
EFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGAVKDSIVQGFQWATR
EGPLCDEPIRNVKFKILDAVIAQEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYYFVE
VMAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTLGQA
FCLSVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKSRRRKGLSEDVSINKFFDD
PMLLELAKQDVMQNYPM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaactgtatgatgagtttggtaattacataggtcctgaattagatagtgat
gaggaagatgaggatgcagaagaagacaagaacagagaggatgccatggctgaatatgca
ggggaagatgatgatgatgacatggatgctgatgaggctgatgatgcagctgagatgcaa
gttgtcttacatgaggataagaaatattatcctacagcagaggaggtgtatggtcctgaa
gtagagactattgtacaagaagaagatacacagccattgacagaaccaattatagctcct
gtgaaaaagaagaaatttacaatggctgaacaagatctaccagatacagtttataatatg
gaatttttggctgatttgatggacagtccagatctgataagaaatataactttgtgtggt
caccttcaccatggaaagacttcttttgttgactgtttaatgcttcaaacacatcctgag
atgcaggtcaatgatgaaaaagatcttcgttactcagacatcttatttacagagcaggag
agaggagttagcatcaaatcaacacctataaccctagtgttgccagataccagaaacaag
tcctaccttgtcaatatgtttgatactccaggacatgtaaatttttctgatgaagtaaca
gcagcattcagacttagtgatggagcagttatatttgtagatgcagctgaaggtgtaatg
ttgaacacagaacgattgataaagcatgctgtacaggaaagactaccaatcacagtgtgt
attaataaagtagatcgattaatactggaattaaaattaccgccaacagatgcttattat
aaactcagacatatactggaggaaataaacagtttaatcagtgtttattcagaagaagat
gaaggccaggttatctcccctgttctaggaaatgtgtgctttgctagctcatacttcaga
ttttgttttacattgggttcttttgctaaaatttacagtgatacatatggtggtataaat
gaaaaagaatttgcaaggagattatggggtgatatttatttcaacggtgcaacgagaaaa
ttcacaaagaaacctcaaactggatctgctcaaagaagttttgtagaatttattctggag
ccattatacaaaatatttgcacaggttgttggtgatgttgatgattgtttacccagagtg
tgtgatgaacttggtattgcattaactaaggaggaaagaaaactgaacattcgcccatta
atgagattagtatggcaaagattctttggagatttcactggctttgttgacatgattgta
gaacatattaaatctccaatgaccaatgcacagactaaaatagaacatatgtatactgga
ccaagtgattctgatctagctgagctcatggcacaatgtgatccagagggcccattaatg
atccatacaacaaaattgtaccctacacaagatgctacaagtttccatgtgtttggaaga
gtcatcagtggtacattacattccaaccaagaagtgagaatactaggagaaaactattcc
ctgcaagacgaggaagattcaagatttggtcaagttggtcgactttgggtgtccgaggca
aggtacaaagtagaagtgaatagagtaccagcaggtaattggatccttatagaaggcatt
gatcagcctattgtaaaaacatcaactattacagatgtatcaagtaatgaagaggtgtac
atatttagaccactcaaatttaacacaaactctgtgattaagatagcagttgaaccagtc
aacccctctgaacttccaaaaatgttggatggtttacgtaaggttaacaaaagttatcca
cttttaaatactaaggtagaagaatcaggagaacacattattttaggtacaggtgaactg
tatcttgactgtgtcatgcatgatctcaggaagatgtactcagaaattgatataaaagta
gctgatccagtagtatcattctgtgagacagttgtggagacatcatcacttaaatgtttt
gctgagactcctaataaaagaaataagttgacaatgattgctgaacctttggaaaaagga
ttagctgaagatattgaaaatgaagttgtacaaataacatggccaaggaaaaggcttgga
gaattttttcagacaaaatatgattgggatttgttagcagctaggtccatttgggccttt
ggtccggatgctactggacccaatattcttgtagatgatactttaccatctgaggtagat
aaaagtttgctaggagcagtcaaggatagtatagtacaagggttccagtgggccacaaga
gaaggaccattatgtgatgaacccatcagaaatgtcaaatttaagatattggatgcagtg
atagcacaggaaccaatccacagaggaggtggacagattataccaacagcccgtagagta
gcatactctgccttccttatggctactccacgtatgatggaaccatactactttgtagaa
gtaatggctccagcagattgtgtatcagcagtatatacagttttagcaagaagaagaggc
catgttacccaggatgcacctgtgccaggatctccattatacacaattaaagctttcatc
cctgccatcgattcctttggttttgagacagatctgagaacacatactttaggacaagcc
ttttgtctgtcggtattccatcattggcagatagttcctggagatccactggacaaaagt
attataatcagaccattagaaccacagccagccacacatttagctagagaattcatgatc
aaatcaagacgaaggaagggcctaagtgaggatgtcagtatcaataagtttttcgatgat
cctatgttgttggagttagctaaacaagatgtcatgcaaaattatcccatgtag
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