Moraxella canis: U0021_03995
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Entry
U0021_03995 CDS
T10189
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcah Moraxella canis
Pathway
mcah03030
DNA replication
mcah03410
Base excision repair
mcah03420
Nucleotide excision repair
mcah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0021_03995 (ligA)
03410 Base excision repair
U0021_03995 (ligA)
03420 Nucleotide excision repair
U0021_03995 (ligA)
03430 Mismatch repair
U0021_03995 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcah03032
]
U0021_03995 (ligA)
03400 DNA repair and recombination proteins [BR:
mcah03400
]
U0021_03995 (ligA)
Enzymes [BR:
mcah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
U0021_03995 (ligA)
DNA replication proteins [BR:
mcah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U0021_03995 (ligA)
DNA repair and recombination proteins [BR:
mcah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
U0021_03995 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0021_03995 (ligA)
MMR (mismatch excision repair)
DNA ligase
U0021_03995 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U0021_03995 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
5_3_exonuc
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
WQE04752
LinkDB
All DBs
Position
complement(890342..892417)
Genome browser
AA seq
691 aa
AA seq
DB search
MNTQTSFFDDASKGSSAKADDKIIAQMRALIEVLKRHNHAYYVMDAPTISDGEYDGLRRE
LMTLEEQYPDLIQPDSPINTVGGEPLPFFTQVAHEVPMLSLGNVFNADDMSGFLRRANER
LGVVIDEYEMELKLDGLAVSLKYQCGQFIQAVTRGDGQVGEDITHNVRTIRNLPLTLAGC
EQIKRLEIRGEVLMPKAGFEKLNRESTARGEKTFANPRNAAAGSLRQLNAAIAAARPLAF
FGYSVNDGLPDGITTQSGAMQWLGQLGFETAPFEVAKSLDEIQAFYAHIIKTRSQLPFEI
DGLVIKVNDLGLQARLGFLSREPRWATAYKFPAETVPTRLMGVEWQVGRTGTLTPVGKLE
PVNVGGVTVSNVTLHNFGEIERLGVMIGDMVNVHRAGDVIPKVSGVITELRPSDAGLITL
PSTCPVCQSPVALPDGEALARCTGGLYCAAQQQEALIHFVARRAMDIDGLGGQWLIKFFE
MGLVRTVADIYKLHEQAEHLMTLEGLGDKSVTKMLAAIETSKQTTLPRFIFALGIRGVGE
STALSLAQQFGDLQPIIDADLEALQAVPDIGEVTAQSIYDFFRAPHNIEVVQALIEAGVH
WQAMDTPDASSLPLAGETWVVTGTLASMGRDEAKDKLIALGAKVAGSVSAKTTRLLAGEK
AGSKLEKAQKLGVAVVLEDEFLALLTSYDQA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaaacttctttttttgatgacgcatccaaaggcagttctgccaaagctgat
gataagatcatcgctcagatgcgcgccttgatcgaggtgctaaagcgccataatcatgcg
tattatgtgatggatgcgccgacgatttctgatggcgaatatgatggtctgcgccgcgag
ctgatgacacttgaggagcagtatcccgatctgatacagcctgacagcccgatcaataca
gttggtggtgagccgctaccattttttacccaagtggcgcatgaggtgccgatgctatca
ctgggcaatgtgttcaatgctgatgatatgtcaggatttttgcgccgtgccaatgagcga
ttgggcgtggtcattgatgagtatgaaatggagctaaagcttgatggattggcggtatcg
ctaaagtatcaatgcggtcaattcatccaagcggtcacgcgcggcgacgggcaggtgggc
gaggacatcacgcataatgtcagaacaatccgtaatttgccattgactttggcaggatgt
gagcaaatcaagcggcttgagatccgcggtgaggtgctgatgccaaaagcaggttttgaa
aaattaaatcgggaaagcaccgcacgcggcgaaaaaacctttgccaatccgcgcaatgcc
gccgcaggctcgctcaggcagttaaacgctgccatcgccgccgcgcgtccgttagcgttt
tttgggtattcggtgaatgatggattaccagatggcatcaccacgcagtcaggcgcgatg
cagtggcttggtcagcttggatttgagaccgcgccttttgaggtcgccaaaagtcttgat
gagattcaagcattttatgcccacattatcaaaacgcgcagccagttaccttttgaaatt
gatggcttggtcattaaggtgaatgatttgggtttgcaggcgcgattgggatttttaagc
cgtgaaccgcgctgggcgactgcgtataaattccctgccgaaactgtgcctaccaggctg
atgggtgttgagtggcaagtggggcggacagggactttgacacctgttggtaagcttgag
ccggtgaatgtgggcggcgttacggtcagtaatgtcacgctgcataattttggtgagatt
gagcgtcttggggtgatgatcggcgatatggtcaatgtccaccgagcaggtgatgtcata
cccaaggtctccggggtcatcactgagctgcgtcctagcgatgctggtttgatcactttg
ccaagcacttgcccggtttgtcaatcgcctgtcgccttgccagacggtgaggcgctggca
agatgtactggcggactgtactgcgccgcccagcagcaagaggcgctgattcattttgtt
gctcgccgtgcgatggatattgatggcttgggcggtcagtggctgattaagttttttgaa
atggggctggttcggacggtggcggatatttataagctccatgagcaggctgagcatttg
atgacgctagaaggcttgggtgataaatcagtcaccaaaatgctggctgctatcgaaaca
tccaaacaaacgaccttgccacgttttatttttgccttggggatccgcggtgttggtgaa
agcacagcgctgtcattggcgcagcagtttggcgatttgcagccaatcattgatgcggat
ttagaagcgctgcaagctgtccctgatatcggtgaagtaaccgcccaatcaatttacgat
ttttttcgcgcgccgcataatattgaagtggtgcaggcgctgattgaggcgggtgttcat
tggcaggcgatggatacgcccgacgcatcgtcgctgccattggctggcgagacttgggtg
gtgactggtactttggcaagtatggggcgcgatgaagccaaagataaactcattgctttg
ggtgctaaagttgccggcagcgtgtcggcgaagaccacacggctacttgctggtgaaaaa
gccggcagcaaacttgaaaaagctcaaaagcttggtgttgcagtcgttttagaagatgaa
tttttagcactactgacttcatacgatcaggcatag
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