Mus caroli (Ryukyu mouse): 110283716
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Entry
110283716 CDS
T05910
Symbol
Trerf1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110283716 (Trerf1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
110283716 (Trerf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
110283716
NCBI-ProteinID:
XP_021004819
Ensembl:
MGP_CAROLIEiJ_G0013486
UniProt:
A0A6P5NSY4
LinkDB
All DBs
Position
17:43832730..44058222
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AA seq
1225 aa
AA seq
DB search
MGDQQLYKTNHVGHGGENLFYQQPPLGVHSGLGHSYGNTISGAGMDAPQASPISPHFPQD
TRDGLGLPIGSKNLGQMDTSRQGGWGSHAGPGNHVQLRSNLANSNMMWGAPTQVEPADGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGASDSA
LRQLLSQKPVEPSASAIASRYQQVPQQPHPGFTGGLPKPALPVGQHAPQGHLYYDYQQPL
AQMSMQGGQPLQAPQVLSGHMQQLQQHQYYPQPPPQQQQAGLQRISVQEMQQQQQPPPQQ
IRPSPPQQQQQLQLQQRQSSLQIPQYYQPQPMMQHLQEQQQPSMHLQPPSYHRDPHQYTP
EQAHAVQLIQLGSMPQYYYQEPQQAYSHPLYPQSHLSQHQQREDSQLKTYSSDRQTPAIL
SSHGDMGPSDTGVADPASSEMTRVTSTFPHQPLLSPSGVHLNNMGSQQQQPSPSAMWPQM
HLPDGRAQSGSPESSGQTKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRAS
PSLKQEEGEKAPPPQPQPQPQPQPPLPPPPPPPPPPQLPPEAERLTPMVMPVSVPVKLIP
PKPSSQGFTNSVAATPTARDKPASSMSDDEMPVLVRMTLSSPHSPQGAAPRAPAEIPRKH
PPIAAKVEEPLKTLPEKKKFRHRPEPLFIPPPPSSYTPNPTSYSGATLYQSQLRSPRILG
DHLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLISGHGPGVHPQLPLTPLTPTPRVLLC
RSSSIDGSNVTVTPGPGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTHRATLVWKPW
PELENQALQQQVENLLNLCCSSALPGGGTNSELALHSLFEAKGDVMATLEMLLLRKPVRL
KCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKI
MRLGRKHRTRLAEIIDDCMTSEEEEEAEEEEEDPEEDRKSIKEEESEVPKSPEPPPTTAL
APTEGPPMQAVGQQPSGNFICEMPNCGAVFSSRQALNGHARIHGGTNQVAKTRGAVPSGK
QKPGGTQSGYCSVKSSPSHSTTSGETDPATIFPCKECGKVFFKIKSRNAHMKTHRQQEEQ
QRQKAQKAAFAAEMAATIERTTGPVGAPELLPLDQLSLMKPVKDVDILDDDVVQQLGVMD
EAEVVGTDLLLDDQDSVLLQGDTEL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaactgtacaagaccaatcacgtgggccacggtggtgagaacctcttc
tatcaacagccaccccttggtgtccacagtgggctgggccacagctatgggaatacaatc
tccggggctgggatggacgccccgcaggcctcacccatctcgcctcacttccctcaagat
actcgggatggtctcggcttgcctattggctccaaaaaccttggccagatggatacctcc
aggcagggaggatggggaagccatgcagggcctgggaaccacgtccagcttcgtagcaac
ttggccaactcaaacatgatgtggggggcgcccacccaggtggagcccgctgatggctat
caatacacttattcccaggccagcgagatccggacccagaaactcaccagtggtgttttg
cacaagctggactctttcacccaggtatttgccaaccaaaacctgcggattcaggtcaac
aatatggcccaggtgctgcacacccaatcagcagtgatggatggagcctctgacagtgcc
ctccgtcaactgctgtctcagaagcctgtggagccctcagcatcagctatagcttcccgc
taccagcaggtgccccagcagcctcaccctggcttcacgggtggactgcccaaaccagcc
cttccagtcgggcagcacgctccccaagggcacctgtattatgactaccagcagcccctg
gcccagatgtccatgcaaggaggacagccactgcaagcccctcaggtgctgtccggccat
atgcaacaattgcagcagcaccagtattacccacagccgccgcctcagcagcagcaagcc
ggactgcagcggatctctgtgcaggagatgcagcagcagcagcagccgccgccgcagcaa
attcgcccctcaccacctcagcagcagcagcagctccagctgcagcagcggcagagttca
ctgcagatacctcagtattatcagccccaacccatgatgcaacacttgcaagagcagcag
cagccatccatgcacctgcagccaccctcataccacagggaccctcatcagtataccccg
gagcaggcacacgctgtccagctgatccagctgggctctatgcctcagtattactatcag
gagcctcaacaggcctatagccaccccctctacccgcagagccacctgtcccagcaccag
cagcgtgaagacagtcagctgaagacatattctagtgacagacagaccccggctattctg
agctcccatggggacatggggccttctgatacaggagtggcggatccggccagctcagaa
atgactcgggtcactagtactttccctcaccaaccgctcctgtcccccagtggggtccac
ctcaacaacatggggtctcagcagcagcagccgtctcccagtgcgatgtggccccagatg
cacttacctgatgggagagcccagtctggatccccggaatcaagcggccaaaccaaagga
gtgtttggggaacagtttgatgccaagaacaagctaacatgctccatctgcctgaaggag
ttcaaaagcctgcccgccctgaacggccacatgcggtcccacgggggaatgagggcatcc
cccagcctcaaacaggaggaaggagagaaggccccaccgcctcagcctcagcctcagccc
cagcctcagccgccactgccacctccgcctcctccgccgccgccaccgcagctccctcct
gaggcagagcgcctcacgcctatggtcatgcccgtgtctgtccctgtcaagctaatccca
cccaagcccagctctcaggggttcaccaacagcgtcgctgccacccccacggccagagac
aagccagccagctcgatgtcggacgacgagatgcctgtgctcgtgaggatgaccctctcc
tcccctcactccccccaaggggctgccccccgtgcgcctgctgaaatcccccggaaacat
ccacccatcgccgccaaagttgaggagcccctcaagaccctaccagagaagaagaagttc
cggcaccggcctgagcccctcttcatcccaccaccgccttcttcctatactcccaacccc
acctcttactcgggggccaccctgtaccagagccagctacgctccccgcgaatcctcggg
gaccacctgctcctggaccccgcccacgaactgcccccctacacgccgccacccatgctg
agccccgtgcgccagggctcagggctcttcagcaatgtcctcatctctggccacggccct
ggagtgcacccccagctgcccctcactcccctcacgcccacgccacgcgtgctgctgtgc
cgttccagcagcattgatggcagcaatgtgacagtcaccccaggacctggagagcagact
gtggatgttgaaccacgcatcaacattggcttaaggttccaagcagagatcccagaactg
caagacgtctccgccctggctcaggacacacacagggccacactggtatggaagccgtgg
cctgagctggaaaaccaggccctccagcagcaagtggagaatcttctgaatttgtgttgt
tccagtgcgctgccaggtggagggaccaactcggaactggctttgcactctctctttgag
gccaaaggtgacgtgatggctaccctggaaatgctgctgctgcggaagccagtcaggtta
aaatgtcatcctttagcaaattaccactacgccggttctgacaagtggacatccctagaa
agaaaactgtttaataaagcattggccacctacagcaaagactttatttttgtacagaag
atggtgaagtccaagacagtggctcagtgcgtggagtactactacacttggaagaagata
atgcgactaggccggaaacaccggacacgcctggcggaaatcattgacgactgcatgacc
agcgaagaggaagaggaggccgaggaggaagaagaagacccagaagaagataggaaatcc
ataaaagaagaggagagtgaagtgcccaagtctccagagccaccgcccaccactgccctg
gctcccacggaggggccacccatgcaggctgttggccaacaaccatcaggcaatttcatt
tgtgaaatgcccaactgtggggctgtgttcagctcccgacaggcactgaacggtcacgcc
cgcatccacggcggcaccaaccaggtggctaagacccgaggtgccgtcccctctgggaag
cagaagccgggtggcacccagagtgggtactgctccgtgaagagttcaccatctcacagt
accaccagtggagagacggaccccgccaccatcttcccctgcaaggagtgcggcaaggtc
ttctttaagatcaaaagccggaatgcgcacatgaaaacccaccggcagcaagaggagcag
cagaggcagaaggctcagaaggcagccttcgcagcagaaatggcagccaccatcgagagg
actacggggccggtgggggcgcccgagctgctgcccctggaccaactgagtctgatgaag
ccagtcaaggatgtggacatcctggatgacgatgtggtccagcagttaggcgtcatggac
gaggccgaggtggtaggcacggatcttcttttggacgaccaagattcggttttgcttcag
ggtgatacagaactctaa
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integrated database retrieval system
