Mus caroli (Ryukyu mouse): 110283784
Help
Entry
110283784 CDS
T05910
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110283784 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110283784 (Spast)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
110283784 (Spast)
Membrane trafficking [BR:
mcal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110283784 (Spast)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
110283784 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
AAA_16
MIT
Mg_chelatase
DUF815
IstB_IS21
nSTAND3
AAA_24
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-GeneID:
110283784
NCBI-ProteinID:
XP_021004931
Ensembl:
MGP_CAROLIEiJ_G0021875
UniProt:
A0A6P5NT73
LinkDB
All DBs
Position
17:70252831..70300839
Genome browser
AA seq
616 aa
AA seq
DB search
MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFA
LLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPSPPAPGPGGEAESVRVFH
KQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLT
HASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGSAATTHKGTPKPNRTNK
PSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggccggacgacggaagaagaaaggctcgggcggcgcgagcccggcgccc
gccaggcctccgccccccgccgcggtccccgcccctgccgccggcccggcccctgcggcc
ggctcgccgcctaagcggaacccgtcttccttctcgtccccgctggtcgtcggcttcgcc
ctgctgcgcctgctggcctgccacctggggctcctcttcgcgtggctctgccagcgcttc
tcccgcgccctcatggccgccaagaggagctccgggaccgcgccggcgcccgcctcgccc
tcgccctcgcccccagcgcccggaccgggtggcgaggccgagagcgtccgcgtcttccac
aagcaggccttcgagtacatctccattgccctgcgcatcgacgaggaagagaaagcagga
cagaaggaacaagctgtggaatggtataagaaaggtatcgaagaactggaaaaaggaatt
gccgttatagttacgggccaaggtgaacagtatgaaagagctagacgccttcaagccaaa
atgatgactaatttagttatggccaaggaccgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacagacggacgtctataacgagagtactaacctgacatgc
cgcaatggacatctccagtcagaaagtggagcagttccgaagaggaaagaccccttaaca
catgctagtaattcattgcctcgatcaaaaactgtcctgaaaagtggctccgcagggctc
tccggtcaccacagggcgcctagttgcagtggtttgtccatggtttctggagcaagaccg
ggacctggttctgcagctaccacacataagggtactccaaaaccaaatagaaccaacaaa
ccttctacacccacaactgcagttcggaaaaagaaagacttgaaaaattttaggaatgtg
gacagcaatcttgctaaccttataatgaatgaaatcgttgacaatgggacagctgttaag
tttgatgacatagccgggcaggagctggcaaagcaagcgctgcaggagattgtcatcctt
ccttctctgcggcctgagttgttcacagggctcagagctcctgctagaggcttgttactc
ttcggtccgccaggaaacggaaaaacaatgctggctaaagcagtagctgcagagtcgaat
gcgacctttttcaacataagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaactggtgagagctctctttgctgtggctcgagaacttcaaccatctataatttttata
gatgaagttgacagtcttttgtgtgagagacgggaaggggagcacgacgctagcagacgg
ctaaagacggaatttttaatagaattcgacggggtgcagtctgctggagatgacagagta
cttgtaatgggtgcaactaacaggccccaggagcttgatgaagctgttctcaggcgtttc
attaaacgggtatatgtgtcattaccaaatgaggagacaagactccttctgcttaaaaac
ctgttatgtaaacaaggaagtccactgacccaaaaagaactcgcacagcttgctagaatg
accgatggatactctggaagtgatctgaccgctttggccaaggatgcagccctgggtcct
atccgagaactgaaaccagagcaggtgaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcacagaatccttaaaaaagataaaacgcagtgtgagtcctcagacc
ttagaagcatacatacgctggaacaaggactttggagacaccactgtttaa
DBGET
integrated database retrieval system
