KEGG   Mus caroli (Ryukyu mouse): 110283925
Entry
110283925         CDS       T05910                                 
Symbol
Mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X3
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110283925 (Mdc1)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    110283925 (Mdc1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 110283925
NCBI-ProteinID: XP_021005126
Ensembl: MGP_CAROLIEiJ_G0021535
UniProt: A0A6P5NVF9
LinkDB
Position
17:32617388..32634343
AA seq 1548 aa
MESTQVIDWDAEEEEETELSSGSLGYSVEPIGQLRLFSGTHGPERDFPLYLGKNVVGRSP
DCSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKPPRVLPPGVSHRLRDQEL
ILFADFPCQYHRLDVPPPLVPRSLLTIEKTPRIRIGSQNSRVLLAEDSEEEGDFPSGRCV
ANGPRNTASPSATVVPESDEEVSSPAPSVPGPSSPFGLGSDTDEEQGQQPGVEESSLADS
SGAAGEAEQPGANGMTAGIQAQPTEHKLKDTKVKKEAGRAGVSDGSVLEKSPTLGEDSDT
EVDEEHKPGFVDSETDVEEERIPVTPSVAPVKKKQVLLAVGIGDPGAPGVAHLQDSLAGS
GTDVEDKTALDVPLERNHTPMVINSDTDEEEEEEVSAALTLAHLKERGIALWSRDPGAEE
VKSQPQVLVERSQSASGRDSDTDVEEESSGQKRKIVPDSPMDVDEALTVTQPESQPPRRP
NDADEYMDMSSPDSHLVVNQASFAVVGKTRAQVEEEVPGPSVILGEKHQVPLEGAQPPEE
AWETAVQEGSSSPEAAASVRPSQQPVAEDAGTECATAFSEQESTLEVGAQSGSPAAPVEQ
VVIYTDTSGNPTLPQREGAQTPTGREREAHVGRTKHAKECCDEPEDVCLPATQCFVEGES
QHPEAVQSLENEPTQLFPCTLPQEPGPSHLSPPTPGADTLDVPWEVLATQPFCLREQSET
SEPQLIDTHEAHGSRPSLPREPPGHQHLVHTSPVHTELLRIEGREIQTVEKAMGRLSCQT
TPAGKASRGDPEPPDHCLFSSVPEASTQSLLPSQSQKQSTTQPLLSTSSSEIPLPESLHT
KPNVRPRRSSRMTPSPHSSAALKPYTTCPTNQPAASRPTSRPTRGRANRSSTRTPELTVP
ADPELQPSTSTAQPVIPKLTSQVTEGRVHSSVKMPEPVLTGPEIQSPTSTEQSVTPDLKP
RATRGRQSKSLNKTPEPLISTGPELQPPTSIEQPVIPKPTSRVTRGRPRKTSVRTPESVV
STGPELQPLTSIEQPVIPEPRATRGRPSKSSIKTPEPVVPTGPELQPLTSAKQPVTPNLT
SRASRGRSSKSTRTPEPIVQTGPEFHPSTSTEQPDTHEPSSQGRTRRSSVRTPESSVPTT
PELQPFTSKKQPTPKPTALVTRGRTYKPSTEDCESVGPVAPDFEPSTSIDHLVTPKVTGQ
SLTQSSPLSASPVSSTPDLKPPVPIAQPVTPEPIPQANHQRKRRATGKQGSRTVPMGHKS
YSALSEPEPQSSASQSSGASEADSPRQKRPRRQASQKTIVIKEEPVETEVKEEPQETAIP
TPEKRKRDHAEEESQGKPTRSRRTKPNQETAPKVLFTGVVDSRGERAVLALGGSLASSVN
EASHLVTDRIRRTVKFLCALGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPEQEKNFSF
SLRDSLCRARERRLLEDYEIHVTPGVQPPPPQMGEIISCCGGTFLPNMPHSYKLHRVIIT
CTEDLPRCAIPSRLGLPLLSPEFLLTGVLKQEATPEAFVFSNLEMSST
NT seq 4647 nt   +upstreamnt  +downstreamnt
atggaaagcacccaggtgattgactgggatgctgaagaagaggaagagacagaactatcc
agtggctccttggggtatagtgtggagcctatagggcagctacgtctcttcagtggtact
catggaccagaaagagatttccccctctaccttggcaagaatgtcgttggtcgaagccct
gactgctctgtggccctgccttttccatccatctccaaacagcatgcagtaattgaaatc
tctgcttggaacaaagcccctattctccaggattgtgggagcctcaatggcactcaaatc
gtaaaacctcctagggtcctacctcctggagtgagccatcgtctgagggaccaggaatta
attctgtttgcagattttccctgccaataccatcgcctagatgtcccaccacccttggtc
cctcggagtcttctaactatagagaaaacccccaggatacggataggatcccaaaattcc
agagttttgttggctgaggattcagaggaagaaggggattttccttctggaaggtgtgtg
gcgaatggaccaaggaatacagcatccccttcagcaacagtagttccagaaagtgatgaa
gaggtctcttctccggccccaagtgtccccgggccatcttcaccctttggtttgggtagt
gacaccgatgaagaacaaggtcagcaaccaggagtcgaggagtcctctttagctgacagc
agtggtgctgcaggggaggctgagcagcctggagctaacggaatgacagctggcatacag
gctcagcccactgagcacaagttgaaggacacaaaagtcaagaaggaggcaggcagggca
ggggtctcagatgggtcagttctggagaagagccccactcttggggaggacagtgacaca
gaagtggatgaagaacacaaacctgggtttgtggacagtgagacagatgtggaagaagag
aggatcccggtgaccccctctgtagcccctgtgaagaaaaaacaagtgctgcttgcagtt
ggtataggagatcctggagcacctggtgtggcacatctgcaggacagcctagctggtagt
ggcacagatgtggaggacaagactgcactggatgttcctctagagagaaaccacacaccc
atggtgatcaacagtgatacagatgaggaggaggaggaggaggtctcagcagcactcacc
ttggcccatctgaaagagagaggaattgctttgtggagtagagacccaggcgcagaagag
gtcaagtcccaaccacaggtccttgtagaacgaagccagagtgcctctgggagagacagt
gacacggatgtggaggaggaatcctcagggcaaaagagaaagattgtcccagacagtccc
atggatgtagatgaggctcttactgtcacacagccagagagccagcctccccgtaggccc
aatgatgcagatgagtacatggatatgagctcccctgacagccatctagtggtaaatcag
gcctcctttgctgtggtaggcaagaccagagcacaagtggaggaggaagtcccagggcca
tctgttatcctgggggagaagcaccaggtgcctctagagggagcccagcctcctgaggaa
gcctgggaaacagctgtacaggaaggctcatcctcaccagaggcagcagcctctgtaagg
cctagccagcagccagtagcagaagatgctgggacagagtgtgctacagctttttctgag
caggaaagtactcttgaggtgggggcccaaagcgggtcacctgcagcaccagtggagcaa
gtggtgatatatacagatacttcagggaatcccaccctgccacagagagagggagcccaa
acccccacaggaagggagagagaagcacatgtgggcagaaccaagcatgccaaagagtgt
tgtgatgaacctgaagatgtgtgccttccagctacccagtgctttgtagaaggggagagc
cagcacccagaagcagtccagagtttggaaaatgagcctacccagctcttcccatgtact
cttccacaagagccaggaccttcccatctcagccctccgactccaggtgcagataccttg
gatgtgccttgggaagtcttggctacacagccgttctgtctaagagaacagtcagagact
tctgagccccagctcattgatacccatgaagctcatggatctcgaccatctctgcctagg
gaaccaccaggacaccaacatctggttcataccagcccagttcacacagagctgttgaga
attgaaggcagagagatacagactgtggagaaagccatgggccgcttgagttgccagacg
acacctgctggaaaggcttccaggggtgatccagagcccccagaccactgcctgttttct
tcagtgcctgaagcttcaactcagagtctcctcccctctcagagccaaaagcagtctaca
actcagcctctgctttccacctcctcttctgagataccccttcctgagagtcttcacaca
aagcctaatgtcaggccacggcggtcctccaggatgaccccctccccacattcctctgct
gcccttaagccttatactacctgccccacaaaccagcctgctgcctctagaccaacatct
cgacccactcggggcagggcaaataggtcctctaccaggaccccagaactgactgtccct
gcagaccccgaactccagccttccacctccacagcacagcctgtcatcccaaaacttaca
tcccaggtcactgagggcagggtacattcctctgttaagatgcctgaaccagttctcaca
ggtcccgaaatccagtctcccacctccacagaacagtctgtcaccccagacctcaaacct
cgggccactcggggcaggcaaagtaaatctctcaacaagaccccagaaccacttatttct
actggccctgaactccaacctcccacctccatagaacaacctgtcatacctaaacccact
tcccgggtcactcggggcagaccacgtaagacttctgtcagaaccccagaatcagttgtc
tccactggccctgaacttcagcctctcacctccatagaacagcccgttatccctgaacct
agggccactcggggtagaccaagtaagtcttctatcaagaccccagaaccagttgtcccc
actggtcccgagctgcagcctcttacctctgcaaaacagcctgtcacccctaacctcaca
tctcgggcctctcggggtagatcaagtaagtctaccaggaccccagaaccaattgtccaa
actggtcctgaattccatccatccacctccacagaacagcctgatacccatgagccctca
tctcagggtaggacacgtaggtcttctgtcaggactcctgaatcgagtgtccccacaacc
cctgaactccagcctttcacttctaaaaaacagcctacccctaagcctacagctctggtc
actcgaggaaggacatataaaccctccactgaagattgtgaatcagttgggccagtggcc
cctgattttgagccttccacctctatagaccatcttgtcacccctaaggtcacaggtcag
agcttaacacagtcttcacccctaagtgcttccccagtttccagtacccctgatctcaag
cctcctgtccccatagcccagcctgttaccccggagcccattccacaagccaatcaccaa
aggaaacgaagggctactgggaagcagggttcccgcacagtccctatgggtcataagtct
tactctgccctctctgaacctgagccccaatcttcagccagccaaagctcaggagcatca
gaagcagactcaccccgtcaaaaacgtccccgaagacaagcctcccagaaaaccatagtc
atcaaggaagaacctgtagaaacagaagtgaaggaagagcctcaggagacagcaattcca
acaccagaaaagagaaagagggaccatgcagaagaagagtcccagggaaaaccaactcga
agccggcgaactaaacctaaccaagaaacagcccctaaggtattgttcacaggagtcgtg
gattctcgtggcgagcgtgcagtgctggctctgggaggcagtctggccagctcagtaaat
gaggcctcccacttggttactgatcgcatccgcaggacagtcaagttcttgtgtgccctg
gggaagggaattcccatcctgtccctgaactggctgtaccagtcccgaaaggctggctgc
ttcttgccacctgatgactacttagtgactgatcctgaacaagagaagaactttagcttc
agccttcgggattccctgtgccgggctcgagaacgaagactgctggaggactatgagatt
catgtgacccctggtgtgcagccgcccccccctcagatgggagagatcatcagttgctgt
ggaggcactttcctgcccaacatgcctcactcttataagcttcaccgagttatcataact
tgcactgaagacctaccacgctgtgctattccatcccgcctggggctacccctcctctct
cctgagttcctcctgactggagtgctgaagcaggaagccacaccagaggcctttgtcttc
tccaatttggaaatgtcatctacctaa

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