Mus caroli (Ryukyu mouse): 110284011
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Entry
110284011 CDS
T05910
Symbol
Pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110284011 (Pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110284011 (Pex6)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
110284011 (Pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_11
AAA_lid_3
AAA_5
AAA_22
AAA_33
nSTAND3
RuvB_N
NACHT
NPHP3_N
AAA_19
TIP49
TsaE
AAA_25
RNA_helicase
AAA_30
AAA_18
AAA_28
Mg_chelatase
Vps4_C
IstB_IS21
AAA_14
DEAD
DUF815
SLFN-g3_helicase
PEX6_4th
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
110284011
NCBI-ProteinID:
XP_021005235
Ensembl:
MGP_CAROLIEiJ_G0021684
UniProt:
A0A6P5NVQ5
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All DBs
Position
17:43427057..43440667
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AA seq
981 aa
AA seq
DB search
MALAVLRVLDPFPTETPPLAVLLPPGGPWPATGLGLVLALRPASESPAKPALLVAAVEGS
GAQGEQGGPGPPPLLVSRALLRVLALGPGARVRARLVRRPPALGWALLATAPGPGLGPRV
GPLLVRRGETLPVPGSRVLETRPALQGLLGPGTRLAVTELRGRAKLGPESRDHSHPPPPP
LVSSFAASHSVRRLRGVLGGTGEALGVSRSCLRSLGLFQGEWVWVAPVTELPNPSQPRLA
QVQVLEPRWELSERLGPNSGQQPGEPLADGLVIVPATLAFNLGCDPLEVGELRLQRYLEG
SIAPEDKGSCSPLPGPPFARELHIEILSSPHYSANGNYDHVLYRHFQTPRVVQEGDVLCV
STAGQVEILEGSLERLPRWREMFFKVKKTVGEAPEGPASAFLADTTHTSLYLAGTVLSHV
PPLPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTA
VTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFARARRCRPAVLLLTAVDLLGRDRD
GLGEDARVASTLRNLLLDEDALSRCPPLMVVATTSRVQDLPTDVQTAFPHELEVPVLSEA
QRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTRIRASGSAGGL
SEEDEGDLCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILE
TIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVG
QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHST
QDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLA
NVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELQSSALLLTMEDLLQAAARLQ
PSVSEQELLRYKRIQRKFAAC
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggctgtcttgcgcgtcctggaccccttcccgacggagacaccaccgttggcg
gtgctgttgcctcccgggggcccgtggccagcgacggggctggggctggtgctggcactg
cggccggcgagcgagagtcccgcgaagcccgcgctgctcgtggcggccgtggaagggtcc
ggcgcccagggcgagcagggcgggccggggcctccgccgctgctggtgagccgcgcgctg
ctgcgggtcctagcgctggggcccggggcgcgagtacgagcgcggcttgtgcggcgtccc
ccggccctgggctgggcgctgcttgccacggctccgggacccgggctcgggcctcgagtc
gggccgctgctggtgcgtcgcggggagaccctccccgtgcccggatcgcgagtgttggag
acgcgaccggccctgcaggggttgctgggcccggggacacggctggccgtgactgagctc
cgcgggcgagccaaactgggcccggagagtcgggaccacagccatcccccgcccccgccc
ttagtgtcgtcctttgcagcttcccactcggtccggcgactccgaggggttctgggaggg
actggagaagcgctgggtgtgagccggagctgtctccggagtctcggactcttccagggc
gaatgggtctgggtggcccctgtcacagagttacccaacccctcgcagccgcgcttggct
caagtccaggttctagaaccgcgctgggagctgtccgagagactgggacccaactccggg
cagcagccgggagagccactcgctgacggactggtgattgtgcctgccactctggctttt
aatctcggctgtgaccccctggaagtgggagagctcagacttcagaggtatttggaaggc
tccatcgccccagaagacaaaggaagctgttcaccactacccgggcctccgtttgctcga
gagttacacattgagattctgtcctcgcctcactacagtgctaatggaaattatgaccat
gtcctgtaccggcactttcagacacccagggtggtccaggaaggggatgttttgtgtgtg
tcaacagctgggcaagttgagatcctggaaggaagcctggagagactgcccaggtggcgg
gagatgtttttcaaagtgaagaaaacggttggagaagccccagaggggccagccagtgcc
tttctggctgataccacccacacctctttatacctggctggcaccgtcctgagtcatgtg
ccaccgctgccttcaggaaggtccccaccctgggacagcttgtctcctccaggcctggag
gccttggtaaatgagctgtgtgctgtcctgaagcctcacctgcagcccggaggaacattg
ctcacaggaaccagctgtgtgcttctgcagggtcccccaggcagcgggaagaccacagcc
gtcacggctgcatgcagccgcctcgggctccatttgctgaaggtgccctgctccagcctc
tgtgcagacagcagtagggctgtggagacaaagctgcaggccaccttcgcccgggcccgc
cgctgcaggcctgcagttctcctgctgacagctgtggacctcctgggccgggaccgagat
ggactgggcgaggatgcccgtgttgcgtccacactccgtaatctcctccttgatgaggac
gctctcagcaggtgccctcctctcatggtggtggccaccacaagccgtgtccaggacctg
cccaccgatgtgcagacggcatttcctcatgagctagaggtgccagtgctgtctgaggct
caacggctcagtatcctgcaggccctcactgcccaccttcccttaggccaggaggttaac
ctgccccagctggcacggcgctgtgcgggctttgtggtaggggacctctatgcccttctg
acccatacctgccgggcagcctgcaccaggatcagagcctcaggctcggcaggtggtttg
agtgaggaggatgagggggacctgtgtgcggctggctttcctttgctggctgaggacttc
gggcaggcattagatcaactgcagacagctcactcccaagctgtgggagcacccaagatc
ccttcagtgtcctggcacgatgtgggtgggctgcaggatgtgaagaaggagatcctagag
accatccagctgcctctggaacaccctgagctgctcagcctgggcctaagacgatcaggc
cttctgctccatgggcccccaggcactggcaagaccctgttggccaaggctgtagccact
gagtgtagcctcaccttcctcagtgtaaagggaccagaactcatcaacatgtatgtgggc
caaagtgaggagaatgtccgggaagtgtttgccagggccagggctgctgctccctgtatc
atcttctttgatgaactggactccttagctccaagccgcggacggagtggagattctgga
ggggtgatggacagagttgtgtctcagctcctagccgagctggatgggctccacagcacc
caggatgtgtttgtgatcggagccaccaacagaccagacctcctggaccctgcccttctg
cggcctggcagatttgacaagctggtgtttgtaggggcgagtgaggaccgggcctcccag
ctgcgtgtgctgagcgccatcacacggaagttcaagctggaggcctctgtgagcctggcg
aacgtgctggattgctgcccaccccagctgaccggcgcagacctctattctctctgctct
gacgccatgatgactgccctcaaacgcagggttcgagacctagaggaagggctagagctg
cagagctcagcactgctgctcaccatggaagacctgttgcaggctgcagcccggctgcag
ccctcagtcagtgagcaggagctgttgcgatacaagcgcatccaacgcaagtttgccgcc
tgctag
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