Mus caroli (Ryukyu mouse): 110284033 Help Entry 110284033         CDS       T05910                                  Symbol Ddx39b Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal03013   Nucleocytoplasmic transport mcal03015   mRNA surveillance pathway mcal03040   Spliceosome Brite KEGG Orthology (KO) [BR:mcal00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110284033 (Ddx39b)   09122 Translation    03013 Nucleocytoplasmic transport     110284033 (Ddx39b)    03015 mRNA surveillance pathway     110284033 (Ddx39b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcal03019]     110284033 (Ddx39b)    03041 Spliceosome [BR:mcal03041]     110284033 (Ddx39b) Enzymes [BR:mcal01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      110284033 (Ddx39b) Messenger RNA biogenesis [BR:mcal03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      110284033 (Ddx39b) Spliceosome [BR:mcal03041]  Complex C   Other components    EJC/TREX     110284033 (Ddx39b)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     110284033 (Ddx39b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD ResIII Motif Other DBs NCBI-GeneID:  110284033 NCBI-ProteinID:  XP_029327292 UniProt:  A0A6P7QFK6 LinkDB All DBs Position 17:31982318..31989928 Genome browser AA seq 357 aa AA seqDB search MKHQRYLTTQVLPGRPKGSLELLAPLSGHLDYEAKDPVRNASHSARGVLHAHREVPRKKP GVANKTKEEPTVGGCCRSVEEQNGELCGGRRELPVAFLLLATGGGVVRGFISSWRSAKPA AERARARAAIAGFRLLAHAPWRRGRREAGASLEPEVKAASRLRPRCCRHTRSQCLENDVD NELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEH PSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAF QISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVMGTPGRIIALDQIRA NT seq 1074 nt NT seq  +upstreamnt  +downstreamnt atgaaacaccaaagatatctcaccacccaagtcttacctggcagaccaaagggctcgctg gagttattggcaccgctctcgggtcaccttgactacgaggctaaggaccccgtgagaaac gcttctcattcggctcgcggagtcctccatgcccacagagaggtgcccaggaagaagcct ggcgtggcaaacaaaactaaagaagagccgaccgtcggagggtgttgcagaagcgtagaa gaacaaaatggagagctctgcgggggaagacgcgagcttcctgtcgcgttcttgctactg gcgaccggaggaggcgtcgtcagaggcttcatttcaagttggcgttctgcaaagccagct gcggagcgcgcgcgcgcgcgcgcggcgatagccggcttccggctccttgcgcatgcgccc tggcggcggggaaggcgggaggccggggcgagcctggaaccggaagtgaaggcagcttcc cgcctccgtccccgttgctgccgccatacacgctcgcagtgcttagagaacgatgtggac aatgagctcttggactacgaagacgacgaggtggagacagccgctggggcagatgggacc gaggctcccgccaagaaagacgtcaagggttcctacgtctccatccacagctccggcttc cgagattttctactcaagccagagctgctccgggccatcgttgactgtggctttgagcat ccatcagaggtccagcatgagtgcatcccgcaggccattctggggatggatgtcctgtgc caggccaagtcaggcatgggaaaaacagcagtgtttgtcctggccacactgcagcagctg gagcctgttactgggcaggtgtctgtgctggtgatgtgtcacactagggagctggctttt cagatcagcaaggaatatgagcgcttctctaagtacatgccgaatgtcaaggtggcagtg ttttttggcggtctgtctatcaagaaggacgaagaggtgctgaagaaaaactgcccacac atcgtcatggggactcctggccgaattatagccctggatcaaataagagcctga

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