Mus caroli (Ryukyu mouse): 110284046
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Entry
110284046 CDS
T05910
Symbol
Pou5f1
Name
(RefSeq) POU domain, class 5, transcription factor 1 isoform X1
KO
K09367
POU domain transcription factor, class 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110284046 (Pou5f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110284046 (Pou5f1)
03021 Transcription machinery [BR:
mcal03021
]
110284046 (Pou5f1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110284046 (Pou5f1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110284046 (Pou5f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
Motif
Other DBs
NCBI-GeneID:
110284046
NCBI-ProteinID:
XP_021005284
Ensembl:
MGP_CAROLIEiJ_G0021520
UniProt:
A0A6P5NVU2
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All DBs
Position
17:32277972..32282748
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AA seq
352 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGDGSAGLEPGWVDPRTWLSFQGPPGGPGIGPGSEVLGISPCPP
AYEFCGGMAYCGPQVGLGLVPQVGVETLQPEGQAGARVESNSEGASSEPCADRPSAVKLE
KVEPTPEESQDMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRF
EALQLSLKNMCKLRPLLEKWVEEADNNENLQEICKSETLVQARKRKRTSIENRVRWSLET
MFLKCPKPSLQQITNIANQLGLEKDVVRVWFCNRRQKGKRSSIEYSQREEYEATGTPFPG
GAVSFPLPPGPHFGTPGYGSPHFTTLYSVPFPEGEAFPSVPVTALGSPMHSN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggctggacacctggcttcagacttcgccttctcacccccaccaggtgggggtgatggg
tcagcagggctggagccgggctgggtggaccctcgaacctggctaagcttccaagggcct
ccaggtgggcctggaatcggaccaggctcagaggtattggggatctccccatgtccgccc
gcatacgagttctgcggagggatggcatactgtggacctcaggttggactgggcctagtc
ccccaagttggcgtggagactttgcagcctgagggccaggcaggagcacgagtggagagc
aactcagagggagcctcctctgagccctgtgccgaccgccccagtgccgtgaagttggag
aaggtggaaccaactccggaggagtcccaggacatgaaagccctgcagaaggagctagaa
cagtttgccaagctgctgaagcagaagaggatcaccttggggtacacccaggccgacgtg
gggctcaccctgggcgttctctttggaaaggtgttcagccagaccaccatctgtcgcttc
gaggccctgcagctcagccttaagaacatgtgtaagctgcggcccctgctggagaagtgg
gtggaggaagccgacaacaatgagaaccttcaggagatatgcaaatcggagaccctggtg
caggcccggaagagaaagcggactagcattgagaaccgtgtgaggtggagcctggagacc
atgtttctgaagtgcccgaagccctccctacagcagatcactaacatcgccaatcagctt
gggttagagaaggatgtggttcgagtatggttctgtaaccggcgccagaagggcaaaaga
tcaagtattgagtattcccaacgagaagagtatgaggctacagggacacctttcccaggg
ggggctgtatcctttcctctgcccccaggtccccactttggcaccccaggctatggaagc
ccccacttcaccacactctactccgtcccttttcctgagggcgaggcctttccctctgtt
cccgtcactgctctgggctctcccatgcattcaaactga
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