KEGG   Mus caroli (Ryukyu mouse): 110284121
Entry
110284121         CDS       T05910                                 
Symbol
Cldn6
Name
(RefSeq) claudin-6
  KO
K06087  claudin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03272  Virion - Hepatitis viruses
mcal04382  Cornified envelope formation
mcal04514  Cell adhesion molecules
mcal04530  Tight junction
mcal04670  Leukocyte transendothelial migration
mcal05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    110284121 (Cldn6)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110284121 (Cldn6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110284121 (Cldn6)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    110284121 (Cldn6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    110284121 (Cldn6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    110284121 (Cldn6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcal03037]
    110284121 (Cldn6)
   04147 Exosome [BR:mcal04147]
    110284121 (Cldn6)
   04515 Cell adhesion molecules [BR:mcal04515]
    110284121 (Cldn6)
Cilium and associated proteins [BR:mcal03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110284121 (Cldn6)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110284121 (Cldn6)
  Exosomal proteins of colorectal cancer cells
   110284121 (Cldn6)
Cell adhesion molecules [BR:mcal04515]
 Immunoglobulin superfamily
  L1 family
   110284121 (Cldn6)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 GPDPase_memb
Other DBs
NCBI-GeneID: 110284121
NCBI-ProteinID: XP_021005418
Ensembl: MGP_CAROLIEiJ_G0021153
UniProt: A0A6P5NRK7
LinkDB
Position
17:19514032..19517117
AA seq 219 aa
MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVVTLLIVLLGLLVYLAGAKCTTCVEDKNSKSRLVLI
SGIIFVISGVLTLVPVCWTAHSIIQDFYNPLVADAQKRELGASLYLGWAASGLLLLGGGL
LCCACSSGGPQGPRHYMACYSTSVPHSRGPSEYPTKNYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctctactggtctgcaaatcttggggatcgtcctgaccctgcttggctgggtcaac
gccctggtgtcctgtgccctgcccatgtggaaggtgaccgccttcatcggcaacagcatc
gtcgtggcccagatggtgtgggaggggctgtggatgtcctgtgtggtccagagcactggc
cagatgcagtgcaaggtgtatgactcactgttggcgctaccccaggacctgcaggctgcc
agagccctctgtgttgtcaccctcctcattgtccttcttggcctgctcgtgtacctggcc
ggagccaagtgcactacctgtgtggaagataagaactccaagtctcgtctcgtgctcatc
tctggcatcatctttgtcatctctggggtcctgacgctcgttcctgtctgctggactgct
cactctatcatccaggacttctacaaccccttggtggctgatgctcaaaagcgggagctg
ggggcctccctctacctgggctgggcagcctcaggccttttgctgctaggtggagggcta
ctatgctgcgcctgctcttctggagggccccagggacccagacattacatggcctgctat
tctacatctgtcccacattctcggggaccctccgaatatcccaccaagaattatgtctga

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