Mus caroli (Ryukyu mouse): 110284129
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Entry
110284129 CDS
T05910
Symbol
Srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04022
cGMP-PKG signaling pathway
mcal05166
Human T-cell leukemia virus 1 infection
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110284129 (Srf)
04022 cGMP-PKG signaling pathway
110284129 (Srf)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110284129 (Srf)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110284129 (Srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110284129 (Srf)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
110284129 (Srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
110284129
NCBI-ProteinID:
XP_021005434
Ensembl:
MGP_CAROLIEiJ_G0021675
UniProt:
A0A6P5NRL6
LinkDB
All DBs
Position
17:complement(43255543..43264820)
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AA seq
504 aa
AA seq
DB search
MLPSQAGAAAALGRGSALGGNLNRTPTGRPGGGGGTRGANGGRVPGNGAGLGQSRLEREA
AAAAAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAAAAAAGGY
GPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVL
LLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEEP
DLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPITNYLA
PVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPVQAIHVHQ
APQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLA
DGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQ
AGSSSNLTELQVVNLDATHSTKSE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
aacctgaaccggaccccgacggggcggccgggcggcggcggcgggactcgcggggcgaac
gggggccgggtccccgggaacggcgcggggctcggccagagtcgtctggagcgggaggct
gcagcggcagcggcgcccaccgccggggccctctacagcggcagcgagggcgactctgag
tccggcgaggaggaggagctgggcgccgagcggcgcggcctcaagcggagtctgagcgag
atggagctcggcgtggtggtcggtgggcctgaggcggcggcggcggccgctgggggctac
gggccggtgagcggcgcggtgagcggggccaagccggggaagaagacccggggccgcgtg
aagatcaagatggagttcatcgacaacaagctgcggcgctacacgaccttcagcaagagg
aagacgggcatcatgaagaaggcctatgagctgtccacgctgacagggacacaggtgctg
ttgctggtggccagtgagacaggccatgtgtatacctttgccacccgcaaactgcagccc
atgatcaccagtgagaccggcaaggcgctgattcagacctgcctcaactcgccagactct
ccgccccgctcagaccccaccacagaccagagaatgagtgccacgggctttgaagagcca
gatctcacctaccaggtgtcggaatctgacagcagtggggaaaccaaggacacactgaag
ccagcattcacagtcaccaacctgccgggtaccacctccacaatccagacagcacccagc
acctctaccaccatgcaagtcagcagcggcccctccttccccatcaccaactacctggca
ccagtgtctgctagtgtcagccccagcgctgtcagcagtgccaacgggactgtgctcaag
agtacaggcagcggccctgtctcctctgggggccttatgcagctgcctaccagcttcacc
ctcatgcctggtggggcagtggcccagcaggtccccgtgcaggccattcatgtgcaccag
gccccacagcaagcgtctccctctcgtgacagcagcacagacctcacgcagacctcctcc
agcgggacagtgacgttgcccgccaccatcatgacgtcgtctgtacccacaactgtgggt
ggccacatgatgtaccctagtccccatgcagtgatgtatgcccccacctcaggcctggct
gatggcagcctcaccgtgctcaatgccttctctcaggcaccatccaccatgcaggtgtcc
cacagccaggtccaggagccaggtggtgtccctcaggtgttcctgacagcaccgtctggg
accgtgcagatccctgtctctgcagttcagcttcaccagatggctgtgatagggcagcaa
gctgggagcagcagcaacctcactgagctacaggtggtgaacctggacgccacccacagc
accaagagtgaatga
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