Mus caroli (Ryukyu mouse): 110284461
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Entry
110284461 CDS
T05910
Symbol
Myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X3
KO
K10357
myosin V
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110284461 (Myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110284461 (Myo5b)
04131 Membrane trafficking [BR:
mcal04131
]
110284461 (Myo5b)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110284461 (Myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110284461 (Myo5b)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110284461 (Myo5b)
mRNA cycle factors
P-body specific factors
110284461 (Myo5b)
Membrane trafficking [BR:
mcal04131
]
Others
Actin-binding proteins
Myosins
110284461 (Myo5b)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110284461 (Myo5b)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110284461 (Myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110284461
NCBI-ProteinID:
XP_021005839
Ensembl:
MGP_CAROLIEiJ_G0022401
UniProt:
A0A6P5NXX1
LinkDB
All DBs
Position
18:70867530..71181929
Genome browser
AA seq
1826 aa
AA seq
DB search
MDPRSSSSSLLHNNTWQYTRVWIPDSDEVWRSAELTKDYKEGDKSLQLRLEDDTILEYPV
DVQNNQVPFLRNPDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINP
YEQLPIYGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVS
AKYAMRYFATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIGFDKKY
HIIGANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGG
NTTIEGVNDADDFEKTRQALTLLGVRDSHQISIFKIIASILHLGSVEIQSERDGDSCSIA
PQDEHLSNFCSLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARDALAKHIYAQL
FSWIVEHINKALHTSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFK
LEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERH
SNSQHFQKPRMSNTAFIVNHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLF
HDDKDSAPATNTAKNRSSSKINVRSSRPLIKVPNKEHKKSVGYQFRTSLNLLMETLNATT
PHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLM
KKRELANTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMI
QKSVRGWLQRVKYRRLRAATLSLQRFCRGYLARRLAEHLRRTRAAIVFQKQYRMLKARRA
YCRVCRAAVIIQSFTRAMFVRRNYRQVLMEHKATIIQKYARGWMARRRFLRQRDAAIVIQ
CAFRRLKARQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAV
TSSHAVEVEKLKKELAHYQQNQEADTSLQLQEEVQSLRTELQKAQSERRVLEDAHNKENG
ELRKRVADLEHENALLKDEKEYLNNQILRQSKAESSQSSVEENLLMKKELEEERSRYQNL
VKEFSQLEQRYENLRDEQTPGHRKNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEEIG
IEKAAMDMTVFLKLQKRVRELEQERKKLQAQLEKGQQDSKKGQVEQQNNGLDVDQDADIA
YNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLANEELEV
RKEEVLILRTQIMNADQRRLSGKNMEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNRL
LEAQLQAQSLEHEEEVEHLKAQVEALKEEMDKQQQTFCQTLLLSPEAQVEFGVQQEISRL
TNENLDFKELVEKLEKNERKLKKQLKIYMKKVQDLEAAQALAQSDRRHHELTRQVTVQRK
EKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPCLPAYILYMCIRHADYTNDDLKVH
SLLSSTINGIKKVLKKHNDDFEMTSFWLSNTCRFLHCLKQYSGDEGFMTQNTAKQNEHCL
KNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVSAMLENESIQGLSGVRPTGYRKRS
SSMVDGENSYCLEAIVRQMNSFHTILCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKD
ACSWSTGMQLRYNISQLEEWLRGKNLHQSGAVQTMEPLIQAAQLLQLKKKTHEDAEAICS
LCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQAQLQERNDPQQLLLDSKHVFPVLF
PYNPSALTMDSIHIPACLNLEFLNEV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaagtagtagctcctctctgctgcacaataatacatggcagtacacaagg
gtctggatccctgactcagatgaggtgtggcgctcggctgaattaaccaaggactacaaa
gaaggggataagagcctgcagctcagactagaagatgatacaattctagaatacccagtc
gatgtccaaaataaccaggtgccattcttgcggaatccagatatcttagtaggagaaaac
gacctcactgcactcagccacctccacgagcccgcagttctgcataacttaaaggtccgt
ttcctggaatccaaccacatctacacttactgtggaattgtgcttgttgccatcaacccc
tacgagcagctgccaatctacggacaggatgtcatctatgcctacagtggccaaaacatg
ggtgacatggacccccacatctttgctgtggcagaagaagcctacaagcagatggccaga
gatgaaaagaaccaatccatcatagtcagcggagagtctggagcaggcaagacggtgtcg
gccaagtacgccatgcgctattttgccaccgttggtggctcagccagtgataccaacatt
gaagagaaggtcctagcatccagccccatcatggaggccatcgggaacgccaagaccact
cgcaacgacaacagcagccgatttgggaaattcattgagattggctttgataaaaagtac
cacatcattggggccaacatgaggacctacttgctggagaagtccagggtggtctttcag
gcggatgatgagaggaattaccacatcttttaccagctctgtgctgctgccagccttcct
gaatttaaagagctcgccctaacatgcgcagaggactttttctatacagcccatggagga
aacacgaccatcgagggtgtgaatgatgcagacgactttgagaagactagacaagctctc
acactccttggagtgcgggattcccatcaaataagcatctttaagataattgcttctatc
ttgcaccttggaagtgtggagattcagtctgagcgggacggggattcctgcagcattgca
ccccaggatgaacacttgagcaacttctgcagcctgctaggaatagagcacagccagatg
gagcactggctgtgtcatcggaagctggtcaccacctcagagacctacgtcaagaccatg
tccctgcagcaagtggtcaatgcacgtgatgccttagccaagcacatctatgctcagctg
ttctcctggattgtggagcacatcaacaaagccctgcacacctcccttaagcagcactcc
ttcatcggggttctggatatctatgggtttgagaccttcgagatcaatagctttgaacag
ttttgtatcaactacgccaatgaaaagctccagcagcagttcaattcgcatgtgttcaag
ctggagcaagaagaatatatgaaggagcagatcccatggaccttgattgacttctatgat
aaccaaccgtgtatagacctcatagaggcaaagctgggtatcctggacctgttggatgag
gagtgtaaggtccctaaaggaactgatcagaactgggcccagaaactctacgaacgacac
tccaacagccagcacttccagaaaccacgcatgtccaacacggccttcattgtcaaccac
tttgcagataaggtggagtacctttcagatggttttctggagaaaaacagggatacagta
tatgaagaacagatcaacatcctgaaggccagcaagttcccactggtggctgatttgttc
catgatgacaaggactctgctccagccaccaacacagctaaaaatcgatcatcttcaaag
atcaacgttcgctcctccagacccctcatcaaagtccctaacaaggagcacaagaaatcc
gtgggctaccagttccgcacttccctaaacctgcttatggagaccctgaatgccacaacg
ccacactatgtccggtgcatcaagcccaacgatgaaaagcttcccttccactttgatccc
aagagagctgtacagcaactccgagcctgcggcgtgctggagaccattcggatcagtgca
gcaggctacccatccaggtggacctaccatgacttcttcaaccggtatcgggtgttgatg
aagaagagagagctcgccaacaccgacaagaagaatatctgcaagtctgtcctggagagt
ctcatcaaggacccagacaagttccagtttggccgcaccaagatcttcttccgagccggc
caggtggcctacctggagaagcttcgggcagacaagttccgggaagccactatcatgatc
cagaagtcggtcaggggctggctgcagagagtgaagtaccgtaggctgagggcagcgacc
ttatccctgcagaggttctgccggggatacctagcccgcaggctggccgagcacttgagg
agaacccgggccgccatcgtgttccagaagcagtaccgcatgctgaaggcccgccgagcc
tactgcagggtctgcagggctgccgtcatcatccagtccttcacacgggccatgtttgtg
cgcaggaactaccgtcaggtcctcatggagcacaaagccaccatcatccagaagtatgcc
cggggctggatggcacggagacgttttctgcggcagcgggatgcagccattgtcatccag
tgtgccttccggaggctcaaggccaggcaggagctgaaggccctcaagatcgaggcccgc
tcggcagagcatctgaaacgcctcaacgtgggcatggagaacaaagtcgtccagctacag
cggaagattgatgaccagaacaaagagttcaagactctgtcagagcagttgtctgcagtc
acctccagtcatgccgtggaggtggagaagctgaagaaggagctggcacattaccagcag
aaccaggaggctgataccagccttcagctgcaggaggaggtacagagcctgcgcactgaa
cttcagaaggctcagtcggagcgcagggtcctggaggatgctcacaacaaggagaatggc
gagctgagaaagcgagttgcagacttggaacatgaaaatgccctcttgaaggatgaaaaa
gaataccttaacaaccaaatcctgcgccagtcaaaagctgaatcttcacagagctctgtg
gaagagaacctcctgatgaagaaggaactagaggaggaacggtccaggtaccagaacctc
gtgaaggagttctcccagctggagcagagatatgagaaccttcgggacgagcaaactccg
ggccacaggaagaacccatcgaatcaaagcagcttagaatctgactccaattacccctcc
atttccacttccgaaatcggagacactgaggatgcccttcagcaggtggaggagattggc
atagagaaggcagccatggacatgaccgtcttcctgaagctgcagaagagagtgcgcgaa
cttgaacaggagaggaagaagctgcaggcgcagctagaaaagggacagcaggacagcaag
aaagggcaggtagaacaacagaacaatggcttagatgtcgaccaggacgcagatatagcc
tacaatagtctaaagagacaggagcttgagtcagagaacaagaagctgaagaatgacctg
aatgagctgaggaaggctgtcgctgaccaagccatgcaggataactccacccacagctcc
ccagacagctacagcctcctcctgaaccagctcaagctggccaatgaggagctcgaggtc
cgcaaagaggaggtgctgatcctcaggacccagatcatgaatgccgaccagcgccgcttg
tctggcaagaacatggagccgaacatcaatgccagaacaagttggcccaacagtgagaag
cacgtggaccaggaagacgccattgaggcctatcacggggtctgccagacaaacaggttg
ctggaggcccagctgcaggcccagagcctggagcatgaggaggaggtggaacatctcaag
gcccaggtggaagccctgaaagaggagatggacaaacagcagcagaccttctgccagacc
ctgctgctctccccggaggcccaggtcgaatttggtgtccagcaggagatatcccggctg
accaatgagaacctggattttaaggaattggtggaaaagctggagaagaatgagaggaag
ctgaagaagcagctgaagatttacatgaagaaggtccaggacttagaagctgcccaggca
ttggcacagagtgacaggaggcaccatgaactcacaagacaggtcacagtccaacgaaag
gagaaggacttccaaggcatgctggagtaccacaaagaggacgaagccctcctcatccgg
aacctggtgacagacctgaagcctcagatgctgtcgggcaccgtgccctgtctgcccgca
tacatactctatatgtgcatcaggcacgcggattacaccaacgatgacctcaaggtacac
tcgttgctgagctccaccatcaacggcattaagaaggtcctcaagaagcacaatgacgac
tttgagatgacatcattctggttatccaacacctgccgcttccttcactgtctgaagcaa
tacagtggtgatgagggttttatgacacagaacactgcgaagcagaatgagcactgtctc
aagaactttgacctcactgaataccgccaggtgctaagcgacctttccattcagatctat
cagcagctcattaaaattgccgagggcttgctacagcctatgatagtttctgccatgttg
gaaaatgagagtatccaggggctgtctggtgtgaggcccactggttaccggaagcgttcc
tccagcatggtggatggagagaattcgtattgcctggaggccatcgtccgccagatgaat
tctttccatacaatcctgtgtgaccagggcctggaccccgagattatcctgcaggtgttc
aaacagctcttctacatgatcaacgctgtgactcttaacaacctactcctgcggaaagac
gcctgctcctggagcacaggcatgcaactcaggtacaacataagtcaactggaagagtgg
cttcggggcaaaaaccttcaccagagcggagcagttcagaccatggagcccctgatccag
gcagcccagctcctccagctgaagaagaaaacccacgaggatgctgaggccatctgctca
ctgtgcacctccctaagcacccagcagattgtcaaaattttaaacctctacactcccttg
aatgaatttgaggaacgggtcacagtgtccttcatacgaacaatccaggctcagctacaa
gagaggaatgaccctcagcagctcctgctggactccaagcacgtgttccctgttctgttt
ccatataacccatctgctctgaccatggactcgatccacatcccggcctgtctcaacctg
gagtttctcaatgaagtctga
DBGET
integrated database retrieval system
