Mus caroli (Ryukyu mouse): 110284503
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Entry
110284503 CDS
T05910
Symbol
Ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110284503 (Ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
110284503 (Ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110284503 (Ercc3)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110284503 (Ercc3)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110284503 (Ercc3)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110284503 (Ercc3)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110284503 (Ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
110284503
NCBI-ProteinID:
XP_021005925
Ensembl:
MGP_CAROLIEiJ_G0022075
UniProt:
A0A6P5NSN4
LinkDB
All DBs
Position
18:29594347..29624830
Genome browser
AA seq
782 aa
AA seq
DB search
MGKRDRVDRDKKKSKKRQYEEEEEDEDDVPGNESQEAVPSAAGKQVDESSTKVDEYGAKD
YRQQMPLKGDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAEGSGGPSTSQGVDAQA
KSDIPKDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCICLEYPLLAEYDFRND
TLNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSGQASRRCGTMSSLSGADDTVYMEYHSSRSKASTKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagagatcgagtggaccgcgacaaaaagaaatccaagaagaggcagtatgaa
gaggaagaggaagacgaagacgacgttcctgggaacgagtctcaggaggcggtgccctcc
gccgctgggaaacaggtggacgagtccagcaccaaagtggatgagtatggagcaaaggac
tacagacagcagatgccactaaagggtgaccatacctccaggcccctctgggtggctcct
gatggccacattttcttggaagccttctctccagtttacaaatatgcccaagacttcctg
gtggcaattgcagagccagtgtgccggcctactcatgtacatgaatacaagctaaccgcc
tactccctctatgcagcggtcagtgttgggctgcaaaccagtgacattactgagtacctc
agaaagctcagcaagactggagttcctgatggaattatccagtttattaagctgtgcact
gtcagctatgggaaggtcaagctggtcctcaaacacaacaggtactttgttgaaagttcc
caccccgatgtcatccagcatcttcttcaagacccagtgatccgggaatgtcgcttgagg
aacgctgagggcgaggccaccgaactcatcacagagacttttacaagcaaatctgctatt
tctaagacggcggaaggcagtggtgggccttctacttcgcagggggtagatgcacaggcc
aagtctgacatccccaaagacttgtttgatttttatgagcaaatggacaaggatgaggag
gaggaggaggagacacagacagtgtcctttgaagttaagcaggaaatgatcgaggagctg
cagaagcgctgcatctgcttagagtaccctctgctggcagagtatgacttccggaatgac
actctcaaccctgacatcaacattgacctgaagcccacagccgtactcagaccctatcag
gagaagagcctgcggaagatgtttgggaacggacgagcacgctcaggagtcattgttctt
ccctgtggtgctgggaagtccctggtcggcgtgactgccgcatgcactgtcagaaagcgc
tgtcttgtcctgggcaactcggctgtgtctgtggagcagtggaaagcccagtttaagatg
tggtcaaccatcgatgacagccagatctgccgcttcacctcagatgccaaggacaagccc
attggctgctccattgccattagcacttactctatgctgggccacaccaccaaaaggtcc
tgggaagctgagagagtcatggagtggctcaaaacccaggagtggggcctcatgatcctt
gacgaggtgcacaccattccagccaagatgttccggcgggtgctgactattgtgcaggca
cactgtaagcttggtttgactgcaacgcttgtccgggaagatgacaaaattgttgactta
aatttcctgattgggcccaagctctatgaagccaactggatggagctgcagaacaatggg
tacatcgctaaagtccagtgtgctgaggtttggtgcccgatgtctcccgagttctaccga
gagtatgtggcaatcaaaacaaagaaacggatcctgttgtacaccatgaatcccaacaaa
ttcagagcctgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaacgtatttgccttgaaggaatatgccattcggctgaacaaaccttatatc
tatgggcccacgtcccagggagaaaggatgcagattctccagaacttcaagcacaacccc
aaaatcaacaccatcttcatctccaaggttggtgacacatcctttgatctgccagaagca
aatgtcctcattcagatctcttcccatggtggctcccgacggcaggaagcccagagactg
ggacgggtactcagagccaagaaagggatggttgcagaggaatacaatgcctttttctac
tccctggtatctcaggacacacaggaaatggcttattctactaagcgacagagattccta
gtggatcaaggttacagctttaaggtaatcacaaagctagctggcatggaggaagaggag
ctggcgttctccaccaaagaggagcagcagcaactcctgcaaaaggtgctggcagccacc
gacttggatgcagaggaggaagtggtggctggagagtttggctctagatctggccaggca
tcccggcgctgtggcaccatgagctccctgtctggcgcagacgacactgtgtacatggag
taccactcctcccgaagcaaggcctccaccaagcacgtgcacccgcttttcaaacgcttc
aggaagtga
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