Mus caroli (Ryukyu mouse): 110284632
Help
Entry
110284632 CDS
T05910
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X3
KO
K24155
rabconnectin-3a
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110284632 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110284632 (Dmxl1)
Membrane trafficking [BR:
mcal04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110284632 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
110284632 (Dmxl1)
RAVE complex
110284632 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
ThsA_Macro
Motif
Other DBs
NCBI-GeneID:
110284632
NCBI-ProteinID:
XP_021006093
Ensembl:
MGP_CAROLIEiJ_G0022264
UniProt:
A0A6P5NYA9
LinkDB
All DBs
Position
18:46697911..46827667
Genome browser
AA seq
3031 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFAVGSVGEQRFTAYASGCDIVILGSNFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISVFEPVSLPKKRKNLEFYSQWQKSGQFFLDSIAHNITWDP
AGNRLLTGSSCLQLWCNINSRKQTEDENPDKTDLNFGNWMCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRPAVTSPDKNSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCFLYGSDCNHWCEPVSLTNNLKRNA
SSKDRVQSALEVNLRPFRRGRSRSLALVAHTGYLPHQQDPHHAHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKCGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
LSEASVEDSIQADVKSDEEMDDGVDDLKINHEKKELGEDKMLPSSSFTPLSSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQRPTGLTRSTSMLISSAHSKSSNNLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPNVGNQKQAHDAINTEECSLAQQNKSNIDMAFQDPNAIYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDSITKLHGRKTQLLHVFQEDFILN
NLEKKRLGVDNILLDSDSSCNGFSEKFYLVVIECTEDNRSLLRMWNLHLRSIPVSLDERI
DAKISEASWLPEDHYSSSPEKILSPFSQKFQACRANLQSTSKLSLFSEMVYSKELALPEG
AEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTNGESATSKNGKIDLV
YVWEEWPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKQPTCNSRSQEFVMHVSIF
ECESTGGSCWILEQTIHLDELSTVLDSGISIDSNLVAYNKQETYLVSKESITSNTKHLVH
LDWMSREDGSHILTVGIGSKLFMYGPMAGKVQDQTGKENQAFPLWDSTKIVPLSKFVLLR
SVDLVSSVEGAPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSNKPESYSGSTPSILSLI
KPSNSSGSGLPPPKRTLTRSMTSLAQKICGKKSIFDPAVDMEDSGLFEAAHVLSPTLPQY
HPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISASGSTTRD
PQAFNKADNRDYTEIDSVPPLPLYALLAADDDSYCSSLEKTGSESSLKKSKQLSKESYDE
LFQTSVLMSDNHMLETDEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPGLTRME
QMSLMALADTIATTSTDIGESRDKNQGGETLDECGLKFLLAVRLHTFLTTSLPAYRAQLL
HQGLSTGHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNARILRRCIEKV
AKAAFHRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFEEERWRKAALKNA
FSLLGKQRFEHSAAFFLLGGCLKDAIEVCLEKLNDIQLALVIARLFESEFDKSATYKSIL
RKKVLGIGSPASELSSSSINAHHDPFLRSMAHWILEDYSAALETLIKQPVTEDEDQVMMS
ACNPIVFNFYNYLRTHPLLLRRHFGSSSDTFSTHMALAGKSGLAGTINLSERRLFFTTAS
AHLKAGCPMLALEVLSKMPKVSKKAKPCCRGSSFLTSKDSSLTLDVREDKSSAVDWSQSL
INGFESSSEGSSERHSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEENEDPPISMKEIRP
LQRKTVKEIDELSYTDSLSTLDENDILNPSEDIIAVQLKFRACLKILTVELRTLSTGYEI
DGGKLRYQLYHWLEKEVVALQRTCDFCSDVEQLQTTFSQSADESGSTEDNDDLHHQTKVK
QLRESFQEKRQWLLKYQSLLRMFLSYCVLHGSHGGGLASVRMELILLLQESQQETTEPIF
SNPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHPDSQTNKVYV
MHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLAHRHSLRTGSLDESVTPNTS
PAQWPGINCLIQLLNSSGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSSNELFRIVAHP
LNEKMWSAVFGGGAHVPSKGQTNSKALSVEGEKQNKHISPSKVSARESSPVPSSSVNQEP
PAVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLESDDEEEEDDDDVLPSGLRLH
EHSNSNSFSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLCHAVLKTLQCWEQVL
LRRLEIHGGPPPNYISSHTCEESASAGPAILRHKALLEPTNTPFKSKNHLALSVKRLWQY
LVKQEEIQETFIRNIFTKKRCLNESLEDSSETIKNSMMEEPNINKIEADLGYPGGKARII
HKESDIITAFAVNRANRNCIAIASSHDVQELDVSAILATQIYTWVDDDTETETKGSEDFL
VIHARDDLSAVQGSTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMTSHPTL
PYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRITRMRFNYQGNKFGIVDADGYLSLYQT
NWKCCPVTGSMPKPYLAWQCHNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPAN
SLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIAI
DPTEEYFVTGSAEGNIKIWSLSTFSLLHTFISEHARQSIFRNIGTGVMQIETGPANHIFS
CGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9096 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggcgcggtgaaccccggcgaccactgcttcgcggtg
ggcagcgtcggcgagcagcgcttcacggcctatgcatctggatgtgacattgtaatactg
ggaagtaattttgaaagattacagatcatcccaggcgctaagcatggaaatattcaagtg
ggatgtgtagactgttcaatgcaacaaggcaagattgcagcatcctatggaaacgttatc
tctgtttttgaaccagtcagtttgccgaaaaaaaggaaaaacttggaattttatagtcag
tggcagaaaagtggccaattttttctggactcaatagcacataatataacctgggatccc
gcaggtaatcgtcttttaactggttccagctgtttgcagctttggtgtaatattaactca
agaaagcaaactgaagatgaaaatccagataaaacagatctgaactttggcaattggatg
tgcatttggcattgcaaaactgcttcccaggtccacctaatgaaattttcaccagatgga
gaattttttgccactgctggaaaggatgactgtcttctaaaggtatggtataatgtagaa
aactggcggccagctgttacctctccagataaaaattcagaaaaacaatcccaaggagaa
attgacttttcttttgtgtatctggcccatccacgagccgtaaatggattttcctggcgt
aaaacaagcaaatatatgccgagggcttctgtatgtaatgtactattgacttgctgtaaa
gataatgtatgtcgtctttgggtagaaacatttttaccaaatgattgcttcctgtatgga
agtgactgcaaccactggtgtgaaccagttagtttaacaaataacttaaagagaaatgct
tccagtaaagaccgagttcaaagtgctctagaagtaaatctgagacctttccgtaggggt
cggagtagatcacttgctcttgtagcacatactggctatctgcctcatcagcaggatcct
caccatgcccacaggaacacaccactgcatgccaatgcactttgtcactttcatattgca
gccagcatcaacccagccacagatatcccacttcttccatctattacatccttgagttta
agtgaaaatgaagagaaatgtggaccttttgtggtacactggttaaacaataaagagtta
cattttactttgtccatggaagtcttcttacagcaacttagaaaaagttttgaacagccc
ttgtctgaagccagtgtagaagattctattcaggcagacgtaaaatctgatgaagaaatg
gatgatggtgttgatgatttaaaaataaatcatgaaaagaaggaattgggtgaagacaaa
atgttaccaagttcaagttttacaccattatcttcagccgccatcgatcatcagattgaa
gtgcttctgtctgaatggagtaaaaacgccgacatgcttttcagtattcatcccatggat
gggtctttactagtttggcatgtagattggctggatgagtaccagcctggtatgtttcgt
caagttcaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac
tctctttgtaaaagcatagtgatgtatgcctgtaccaagaacgttgacttggctattcaa
caaggaaaacagagacctactggcctcactcgttccacatcaatgcttatctcctctgct
cacagtaaatcatcaaataacttaaaattaagtatttttacccctaatgttatgatgatt
tcaaagcatgctgatggttctttgaatcagtggctggttagttttgctgaggaatctgct
ttttctacagtgcttagtatttctcacaaatccagatattgtggtcatcgttttcatctt
aatgacttagcttgccactcggtattacctttattactgacaacgtcacaccataatgca
ttaaggacaccaaatgttggtaaccaaaagcaagctcatgatgctataaatactgaagaa
tgctccttggcacaacaaaataaaagcaacattgatatggcatttcaagatcccaatgca
atttacagtgagcttattctttggagggtcgatccagttgggccactatctttttctgga
ggagtatctgaacttgcccggattaattctcttcatgtttctgccttttccaatgtggca
tggctccctacgctcatacccagttactgtctaggtgcatactgcaactctcctagtgca
tgctttgtagctagtgatggacagtatctgaggttatatgaagcagttattgatgccaag
aaacttttatatgagctttccaaccctgaaatttctaaatatgttggtgaagtgtttaac
attgtcagtcagcaatcaacagccagaccaggatgcattattgcattagattctattacc
aagcttcatggcagaaaaacccagttgcttcatgtttttcaagaagacttcattttgaat
aaccttgagaagaaacgtctgggagtagataacattttattggattcagacagctcatgt
aatggattttctgaaaagttctacctggttgtgatagagtgtactgaagacaaccgttca
ctgttacgcatgtggaatttacacttaaggtcaattcctgtctcactggatgaaagaata
gacgcaaaaatatcagaagctagttggctaccagaagaccattattcctcttctccagag
aagattctatctccattttcacagaaattccaggcttgcagagctaatctccagagtacc
agcaagttgtctctcttctctgaaatggtatacagcaaagagttggctttgccagaagga
gctgagataataagtgttaagccttcagcaggacacctgagttcatcttccatatatcct
gtttgcagtgccccttatttattggcaacttcatgctcagatgaaaaagtaagattttgg
cgatgcagagtaacaaatggagaatcagcaacatcaaagaatggaaaaatagatcttgtg
tatgtttgggaagaatggccattactcattgaagatggacttcagagcaatagtagtatt
actgtacctggtagacctgtagaagtgagctgtgcacatacaaatcgcttagcagtagct
tataaacagcccacttgtaatagtagatctcaggaatttgtgatgcatgtaagtatcttt
gaatgtgagtctacaggaggctcatgttggatccttgagcagacaattcatttagatgag
ttaagtacagtgttggattctggcattagtattgatagcaatttagtggcttataataaa
caggagacatatttagtcagtaaagaaagtattacatcaaacacaaaacatttggttcac
ttagattggatgtctagagaagatggttctcatatcttaactgtagggattggctcaaaa
ctttttatgtatggacctatggctggcaaggtacaagatcagactgggaaggaaaaccag
gcatttcctctctgggacagtactaaaattgtacctctttctaaatttgtactgttacga
agtgtggacttggtttcttctgtagaaggtgccccacctttccctgtttctttatcatgg
gtccgggatggcatccttgtggtaggaatggattgtgaaatgcacgtatattcccagtgg
cagccatctaataaaccagagtcctacagtggaagcactccatctatactaagcttaata
aagccaagtaactcatcaggttctgggctaccccctccaaagaggactctgactcggtcc
atgaccagccttgcacagaagatctgtgggaagaaaagtatatttgaccccgcagtggat
atggaagattccggcctcttcgaagccgctcatgtactttctccaactttacctcagtac
catcccctgcagcttttggaactcatggatcttggcaaagttcggagagccaaggccatc
ttgtcacatcttgtcaaatgcattgctggggaagttgtggctctgaatgaagcggaatcc
aatcatgagcgccgccttagatctctcaccatcagtgctagtggaagcaccaccagagac
ccccaggcattcaacaaagctgacaacagagactacacagagatagactctgtccctcca
cttcctttgtacgccttacttgcagcagatgatgacagctattgctcatctttagaaaaa
actgggagtgagagttccttaaagaaatcaaaacagttatcaaaagaaagttatgatgag
ctttttcagacttcagttctgatgtctgataatcacatgctagaaacagatgaagaaaat
actaagcccagagttattgacctttcacaatacagtccaacttactttggtcctgagcat
gctcaggttctttctggccatttacttcattctagcttaccagggctcaccaggatggag
cagatgtctttgatggccttagccgatacaattgcaactacaagcactgatattggagaa
agtagagacaaaaatcaaggtggggaaactctagatgagtgtggattaaagtttcttttg
gctgttcgactccatacctttcttacaacttcccttccagcctaccgagctcaactcctt
caccaaggcctttctactggtcattttgcttgggcttttcattcagtagcagaggaagaa
ctgctgaatatgttgccggccatgcagaaagatgatccaacttggtctgaactgagagca
atgggtgtggggtggtgggttcgcaatgctcgcatcttgcgcagatgcatagaaaaagta
gccaaagcagcctttcatagaaataatgatcctttagatgctgcaattttttaccttgca
atgaaaaaaaaagctgtgatctggggattatatagatctcaaaaagacaccaaaatgaca
cagttttttgggcacaattttgaggaagagaggtggcgtaaagcagctttgaaaaatgcc
ttttctttattaggcaagcaaaggtttgaacattctgcagcattttttcttctaggtggt
tgcctcaaagatgcaattgaggtatgtcttgagaaacttaatgacattcagttggctctt
gtaatagcaagactatttgaatctgaatttgataagtcagcaacatacaagtctatttta
cgcaaaaaagttttgggaattggttctccagccagtgagctcagttcgtcaagcataaat
gcccatcatgacccctttcttcggagtatggcacattggatcttagaagattatagtgct
gctctggaaacattaataaagcaaccagttacagaggatgaagatcaagtcatgatgtca
gcctgtaatcctatagtttttaatttctacaattacctaagaacacatcctcttttgcta
agaagacattttggatcgtcatcggatacattttcaacacacatggctttagcaggaaaa
agtggactggccggaacaattaatctaagtgaaagaagattattttttactactgctagt
gctcacctaaaagctggctgcccaatgttggctttggaagtattgtcaaagatgcccaaa
gtcagtaagaaagcaaaaccctgttgcagagggtctagttttttaactagtaaagattct
tcactaacattggatgtacgagaagacaagtcttctgccgttgactggtcacagtcgctg
ataaatggttttgaatcttcttcagagggttcctcagagaggcactcaaattctaccctt
tcttttgattggagccaaccgagtgtggtatttcaagatgactctttggagttgaaatgg
gatagtgataatgatgaagaaaatgaagatccccctatttcaatgaaagaaataagacct
ttgcagagaaagacagttaaagaaatagatgaattgagttacacagactctttaagcaca
ctagatgaaaatgacattttaaatccatcagaagatataattgctgttcaactaaaattt
agagcatgtttaaagattctcactgtagaacttcgtactttatctactggctatgaaata
gatggtggaaaattgcgttaccaactctaccactggcttgaaaaagaggtagtagctctt
cagaggacttgtgacttctgctcagatgtagaacagctgcagaccacatttagccaaagt
gcagatgaatctggatcaactgaggataatgatgatttgcatcaccaaacaaaagtgaaa
caactgagagaaagtttccaggaaaaaaggcagtggctcttgaaatatcagtcactctta
agaatgtttcttagttactgtgtgcttcatggctctcatggtgggggtcttgcatcagtg
agaatggaattaattttacttttgcaagaatctcagcaggaaacaacagaaccaatattt
tctaaccctttgtcagaacaaacttcagtgcctcttctctttgcttgtacagccagtgcc
aaaacagtagttgccaatccattattgcaccttagtaatttaacacatgatattctacat
gccataataaattttgattcaccaccacatcctgatagccaaaccaataaagtgtatgta
atgcatactttagcagcctcactttctgcttgtatttatcagtgcctttgtggtagtcac
aactacagttcatttcaaacaaatcagtttactggaatggtttatcaaacagtacttctt
gcccatcgacattctttgagaactggaagtttggatgaatcagtaactcccaacacatca
ccagctcaatggccaggaataaattgtctaattcagcttttgaattcctctggtgaagaa
gctcagccaggacttacagtcttgctttgtgaaattctcacagcagtatatcttagtctg
ttcattcatgggctggcaacacactctagtaatgagctatttcggattgtagcccacccc
ctaaatgaaaaaatgtggtctgcagtatttggtggaggagcacatgttcccagcaaagga
cagacaaactcaaaagccttatctgttgaaggagaaaaacaaaacaaacatattagtcca
tcaaaagtgtctgccagagaatcttctcctgtaccttcttcctctgtgaatcaggagcca
cctgcagtcaaggagaagttcatcccacctgaactaagtatctgggactacttcatagcc
aagccttttctaccaccttcccaaagtagagcagagtatgattctgaggaaagtctagaa
agtgatgatgaagaagaagaggacgatgatgatgttttgccttctggtctccggctccat
gagcattcaaactcaaattcattcagttggtctttgatgagattggctatggtccagttg
gtgctcaacaatttgaagactttctatccctttgcaggtcatgatcttgcagaactacca
gttagttcacctctttgtcatgcagttctaaaaactcttcagtgctgggaacaagttctt
ctccggcgccttgagatccatggtggaccacctccaaactatatctcaagtcacacttgt
gaagagagtgcgtctgcaggccctgcaatactccgtcacaaagctttactagaacctaca
aacactcctttcaaatccaaaaatcacctcgcactgtctgtgaagaggctttggcagtac
ttggtgaaacaggaagaaattcaagaaacttttatcagaaatatattcacaaagaaacga
tgtctaaatgagtcattagaggacagcagtgaaaccatcaaaaattctatgatggaggag
ccaaacatcaataagatagaggcagatctgggatatcctggaggtaaagcaagaattatt
cataaggaatctgatatcattactgcctttgctgttaatagggcaaatagaaattgcata
gcgattgcctccagccatgatgtacaagaactggatgtttctgcaattctggccacacag
atctatacttgggtggatgatgatacagaaacagaaaccaaaggatcagaagacttcttg
gttatacatgctcgtgatgatttatcagctgtccagggttcaactccatacacacacagc
aaccctggcactccaatcaacatgccgtggcttggcagtacacagacgggcagaggagca
tccgtgatgcttaagaaggccattaataacgttagaagaatgacatcacatccaactctt
ccttactatctgaccggagctcaagatggaagtgtcagaatgtttgaatggggccattct
cagcaaataacctgttttcgatctggtggcaattcaagaattacaagaatgagatttaac
tatcagggaaataagtttggaattgttgatgctgatggatatttaagtttgtaccaaaca
aactggaagtgttgcccagttactgggagcatgcctaagccatatctggcttggcagtgt
cataacaaaacagccaatgattttgtcttcgttagttcctcctctctgatagctacagct
ggtctttcaagtgacaatagaaacatatgtctatgggatacacttgtagcgcctgccaat
agtttagtccatgcttttacctgccatgatagtggggctacagttttagcctatgctccc
aaacatcaactcctcatatcgggtggcagaaaaggtttcacatgtatatttgaccttcga
caacgacaacagaggcagctttttcagagccatgattcccctgttaaagccattgctatt
gatccaactgaagagtactttgttacaggatctgcagaaggcaatataaagatttggagt
ctttcgacctttagtcttctccatacttttatcagtgaacatgctcggcagtctattttt
agaaatattggaactggagtcatgcaaattgagacaggaccagcaaatcacattttctct
tgtggagctgatggaacaatgaaaatgaggatactgccggatcagtttagccctttaaac
gaggtgttgaaaaatgatgtgaaatttatgctgtaa
DBGET
integrated database retrieval system
