Mus caroli (Ryukyu mouse): 110284661
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Entry
110284661 CDS
T05910
Symbol
Rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110284661 (Rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110284661 (Rbm22)
Spliceosome [BR:
mcal03041
]
Complex B
Other components
Prp19-related factors
110284661 (Rbm22)
Complex C
110284661 (Rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
110284661
NCBI-ProteinID:
XP_021006140
Ensembl:
MGP_CAROLIEiJ_G0022307
UniProt:
A0A6P5NT28
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All DBs
Position
18:57341978..57354030
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AA seq
487 aa
AA seq
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MQGRTRELRRSATNLPLRREATPQLEATPHVALGAQIIRSPALPLCLPGLWRSVSRVGSR
SCPGTPDMATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFT
VFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVN
KEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGEC
KRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITT
LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIV
NGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLP
PSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAH
AGKHSSP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacgtacacgggaactccgcagaagcgccacgaacctcccgctcagacgtgag
gccacaccccaacttgaagccacgccccacgtcgccctgggcgcgcagattatacgtagc
ccggcgctacccctgtgcctgccgggattgtggcggtcggtctctcgagtcggaagccgg
agctgtcccgggactcccgatatggcgacttctctgggttccaacacctacaacaggcag
aactgggaggacgcggacttccccattctgtgtcagacgtgtcttggagaaaacccttat
atacgaatgaccaaagaaaaatatggaaaagaatgcaaaatctgtgccaggccattcaca
gtgtttcgctggtgccctggggtccgcatgcgcttcaagaagactgaagtgtgccaaacc
tgcagtaaattgaagaatgtttgtcagacctgcctgttagacctagaatatggcctaccc
atccaggttcgtgatgcaggattatcatttaaagatgacatgcctaagtcagatgtcaat
aaagaatattacacccaaaatatggaaagagaaatttctaactctgatggaacacgacca
gttgggatgctaggaaaagctacatccaccagtgacatgctcctcaagttggcccggacc
acaccctactacaaaaggaatcggccccacatttgttccttctgggtgaaaggagagtgt
aagagaggagaggagtgtccatacagacatgagaagcctaccgacccagacgaccctctt
gctgatcagaatatcaaagaccggtactatggaatcaacgaccccgtggctgacaagctt
ctaaagcgggcctcgaccatgccccgcctggacccaccggaggataagaccatcaccacc
ctgtatgtcggcggtctgggagacaccatcactgaaacagatctcagaaatcatttctac
cagtttggagagatccgcaccatcactgttgtgcagaggcagcagtgtgccttcatccag
ttcgccaccaggcaggctgccgaggtagccgccgagaagtcctttaacaagctgatcgtg
aatggccggagactcaatgtcaagtggggaagatcccaagcagccagaggaaaagaaaaa
gagaaggatggaaccacagactctgggatcaagctagaacctgtgccaggactgcctgga
gctctgcctccacctcctgcagcagaagaggaggcgtctgccaactacttcaacctgccc
ccaagtggtcctccagcagtggtgaacattgccctgcccccaccccctgggatcgcccca
ccgccacccccaggttttggaccacacatgttccaccccatgggaccgccccctcctttc
atgagggctccaggaccaatccactacccttctcaggaccctcagagaatgggtgctcat
gcaggaaaacacagcagcccctag
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