Mus caroli (Ryukyu mouse): 110284728
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Entry
110284728 CDS
T05910
Symbol
Taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110284728 (Taf4b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110284728 (Taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110284728 (Taf4b)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110284728 (Taf4b)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110284728 (Taf4b)
Coactivators
SAGA/TFTC/STAGA complex
110284728 (Taf4b)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110284728 (Taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
110284728
NCBI-ProteinID:
XP_021006249
Ensembl:
MGP_CAROLIEiJ_G0022016
UniProt:
A0A6P5NYM5
LinkDB
All DBs
Position
18:11325451..11444449
Genome browser
AA seq
849 aa
AA seq
DB search
MPAGLTEPAGAAAPVVSSASGAVTMAPVAALPVRVEGTPVALGPVTKAPVSVCVESVAPQ
PLPAPVGTLVTKVVPVTALPKLGSPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIKS
NSGQLMLVSPQQAVTGAKTTSNITPRPAVPANTQTVKICTVPNSSSQLMKKVTVAPVKNL
TQIGTTVATTASSTSSGQPVALPSSVITVTPAKLVNTVSTLKSSSLGVLSTPSNDASLKA
ETSLAAQTALPPTVLENVKKCKNFLSMLIKLACSGSQSPEMGQNVKKLVEQLLDAEIEAE
EFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPNSQSFIENCVKEVSGDVVISSCTMTT
ATSPVVTSTVSPVLVSGATAPRTLSVQQTLNPLAGPGVANTGVVTLHSVAPASATGGTTA
ATVLLQTSKPLTTSVPNTVAAVSLQPENPVVSGAAVTLAIPSATFGEASATPLCLPSVKP
AITSAGTKADKPAIGTPVQIVTQPSPLLPQAAGIPQTAKVKQLVVQQPSGSRVNHVTSIS
HSSPLSTQNCGQKTPVNAVMPATSIIKQITLPGNKLLSLQAQTSSIQSNKIKENGPTCFR
GEDDINDVTFMAEVNLDEENACILAHSDFVGTLLQSCKEEPFLVIGALQKRILDIGKKHD
ITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTIYKGSENYILSTDTRSQLKFLEKL
DQLEKQRKDLEEREILLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQYRDANLTALA
AIGPRKKRPVESGNESFKDNPSTSGTSSLTATKPFRPRITRICLRDLIFCMEQEREMKYS
RALYLALLK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggccttacggagccggccggcgccgctgctcctgtagtctcgagcgcgtcg
ggggccgtgaccatggctccggtcgccgcgctgcccgtgcgggtggagggcactccggtg
gccctgggccctgtgactaaggctcctgtcagtgtctgcgtggagtctgtggcgccccag
cccttgccagccccagtggggactctagtgaccaaagtggttcctgtcactgcccttcct
aaactcggcagccctaggctgcccgctcctcagatagtcaccgtgaaaacgcccggcacc
acgacaatccaactaccggctaatttgcagcttcctccaggaacagttttgatcaaaagt
aacagtggtcagttgatgctggtatcgcctcagcaagctgtaacaggagccaagaccaca
agtaacataactccaagaccagcagtaccagcaaacactcaaacagtcaagatctgtaca
gtgccgaattctagctcacaattaatgaagaaagtaacagtggcgcctgttaaaaatttg
acacagataggaactactgtggcaaccactgcctccagtacttcctcaggacaacctgtg
gctctaccaagcagtgtcatcacagttactcctgcaaagctggtgaatactgtatccacg
ctgaagtcatcaagtttgggagtgttatctaccccctcaaatgacgcaagtctcaaagcc
gagacttcactagctgctcagactgcgcttcctccgacagtgctagaaaatgtgaaaaaa
tgtaaaaacttcctttcaatgttaataaaactagcatgtagtggatcccagtctccagaa
atggggcagaatgtgaagaagctggtggagcaacttttggatgcagagattgaagcagaa
gagtttactaggaaactatatattgaactcaagtctgcacctcagccgcaccttgtccct
tttctcaagaagagtgtggttgccctgagacagcttcttccaaattcccagagcttcatt
gagaactgtgtgaaggaagtttctggtgatgtggtcatttcctcctgtaccatgacaaca
gcaacgtctcctgtggtgacaagtacagtttccccagtccttgtttctggagcaacagca
cccagaactctgtctgttcagcagaccctgaatccacttgctggtccaggagtagcaaac
actggagttgtgacactgcattctgttgccccagcttctgcaacaggaggtacgacagct
gcaactgttttgcttcaaacttcaaaaccactaacaacatcagtaccaaatacagtggca
gcagtgtcccttcagcctgagaatccagttgtgtctggggcagcagtaacactggctatt
ccatcagcaacttttggagaagcgtccgctacacctctttgtcttccatctgtgaagcct
gccattacctctgctgggaccaaagctgataaacctgccattggcactccagtccagatc
gttacacagccgagccccctccttccacaggcagctggcattccacagacagccaaagtc
aagcaactagttgtacagcagccttcaggaagcagggtgaatcatgtgacctccatttcc
cattcctcaccattgagcactcagaactgtgggcagaagacaccagtgaatgctgtgatg
cctgctacttccatcataaagcaaattactctgcctggaaataaacttttgtcgcttcaa
gctcaaacatcttctattcagagcaataaaataaaagagaatggaccaacatgcttcaga
ggtgaagatgacatcaatgatgtgactttcatggcagaggtcaaccttgatgaggaaaat
gcctgcatcttagcacattctgactttgttggcacacttcttcagtcatgtaaagaagag
ccattcctcgtcattggagcgctacagaagagaattttagacattggtaaaaagcatgac
attacagaacttaactcggatgctgtgaacttgatctcccatgcaacacaggagagatta
cgaggccttctagagaaactaactacaattgctcagcatcgaatgactatttacaaggga
agtgaaaattacatcttgtctactgataccagatcacagctcaaatttcttgaaaagctc
gatcaattggagaaacagaggaaggatttagaggaaagagagattttactaaaggcagcc
aagagtcgctccaataaagaagatccagagcagctgagattaaaacagaaagccaaagag
ttgcagcagttggagcttgcccagatccagtacagagatgctaatctcacagctcttgca
gctattggaccaaggaagaagagaccagtagaatcaggaaatgagagcttcaaagataac
ccttctacttctgggacttccagcctaacagccaccaaaccttttcgtccaagaatcaca
agaatctgcctcagggatttgatattctgtatggaacaggaaagagagatgaagtattct
cgagccctataccttgcccttcttaagtga
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