Mus caroli (Ryukyu mouse): 110284738
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Entry
110284738 CDS
T05910
Symbol
Cxxc1
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110284738 (Cxxc1)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110284738 (Cxxc1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110284738 (Cxxc1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
110284738 (Cxxc1)
COMPASS/SET1 complex (yeast)
110284738 (Cxxc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
110284738
NCBI-ProteinID:
XP_021006265
Ensembl:
MGP_CAROLIEiJ_G0022399
UniProt:
A0A6P5NYN9
LinkDB
All DBs
Position
18:70674616..70680010
Genome browser
AA seq
664 aa
AA seq
DB search
MEGDGSDLEPPDAGDDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRECREKDPKLEIRYRHKKCRERDGSERAGSEPRDEGGGRKRPASDPELQR
RAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHHQQQQQQQQQIKRSARMCGECEACR
RTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSEALPRPR
RPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEPPEATATPEPLSDEDLALDPDLYQDFCA
GAFDDHGLPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKVMERKEERYKRHRQKQ
KHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRI
QQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEEN
NENDSDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCD
VYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYC
WEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRS
SADR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatggctcagacctggaacctccggatgctggggacgacagcaagtctgag
aatggggagaacgctcccatctactgcatctgccgcaaaccggacatcaattgcttcatg
attggatgtgacaactgcaacgagtggttccatggagactgcatccggatcactgagaag
atggccaaggccatccgggaatggtactgtcgggagtgccgagagaaggacccgaagctg
gagattcgttaccgccacaaaaagtgccgggagagggatggcagtgagcgggccggcagt
gagccccgggatgagggaggagggcgcaagaggccggcttcagatccagagctgcagcgc
cgggcagggtcagggacaggggttggggccatgcttgctcggggctctgcttcgccccac
aaatcttctccacagcccttggtggccacacctagccagcaccaccaccaacagcagcag
cagcagcagcagcaaatcaaacgatcagctcggatgtgtggtgagtgcgaggcctgccga
cgcactgaggactgtggccactgtgacttctgccgtgacatgaagaagtttgggggcccc
aacaagatccggcagaagtgccggcttcgccagtgtcagctgcgggcacgggaatcgtac
aagtacttcccttcctcgctctcgccggtgacaccctcagaggccctgccaaggccccgc
cggccaccacccactcaacagcagccacagcagtcccagaagctggggcgtatccgtgaa
gatgaggggacagtgttgtcatcagtggttaaggagccaccagaggctacagcaacacct
gagccactttcagatgaggacctagcactggaccccgatctgtaccaggacttctgtgct
ggggcctttgatgatcacggcctaccctggatgagcgatgcagaagagtccccgttcctg
gatcctgcactgaggaagcgggcagtgaaggtgaagcacgtgaagcgccgagagaagaag
tccgagaagaaggtgatggagaggaaggaggagaggtacaaacggcatcgacagaagcag
aaacataaagacaaatggaaacacccagagagggctgatgccaaggaccctgcgtctctc
ccacagtgcctggggcctggctgtgtgcgggctgcccagccggggtccaagtattgttca
gatgactgtggcatgaagctggcagccaaccgaatctatgagatcctcccccagcgcatc
cagcagtggcagcaaagcccctgcatcgctgaagagcacggcaagaagctacttgagcgg
atccgccgtgagcagcagagcgcccgcacccgccttcaggaaatggagcgcagattccac
gagcttgaggccatcattcttcgcgctaagcagcaagctgtgcgagaggatgaggagaac
aacgagaatgacagcgatgacacagatctgcagatcttctgcgtctcctgtgggcatccc
atcaacccacgagttgccttgcgtcacatggaacgttgctatgctaagtatgagagccag
acgtcctttgggtccatgtaccccacacgcatcgagggggctacccgactcttctgtgat
gtctacaatcctcagagcaagacatattgtaagcggctccaggtgctgtgtcctgagcac
tcccgggaccccaaagtgccagctgatgaggtctgtgggtgtccacttgtacgtgatgtc
tttgagctcacaggtgacttctgccgcctgcccaagcgccagtgtaatcgccattattgc
tgggagaagcttcggcgtgcagaagtggacttggagcgtgtgcgggtgtggtacaagctg
gacgagctctttgagcaggaacgtaatgtacgcaccgccatgaccaacagagcagggcta
cttgccctgatgcttcaccaaacgatccaacacgatccactcactaccgaccttcgctct
agtgccgaccgctga
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