Mus caroli (Ryukyu mouse): 110284741
Help
Entry
110284741 CDS
T05910
Symbol
Lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110284741 (Lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110284741 (Lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mcal04091
]
110284741 (Lman1)
Membrane trafficking [BR:
mcal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
110284741 (Lman1)
Lectins [BR:
mcal04091
]
L-type lectins
110284741 (Lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
ATG17_like
Lectin_legB
KxDL
DUF4407
Golgin_A5
PRP1_N
Motif
Other DBs
NCBI-GeneID:
110284741
NCBI-ProteinID:
XP_021006273
Ensembl:
MGP_CAROLIEiJ_G0022359
UniProt:
A0A6P5NTC6
LinkDB
All DBs
Position
18:complement(62721906..62743554)
Genome browser
AA seq
517 aa
AA seq
DB search
MAVSRRRGPQAGARSFFCALLLSFSQFIGSDGTGGDPAAPGAAGTQAELPHRRFEYKYSF
KGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKAKAAFENWEVEVTFRV
TGRGRIGADGLAIWYTENQGLDGPVFGSADTWNGVGIFFDSFDNDGKKNNPAIVVIGNNG
QINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAK
VENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTAEKDISEKEKEKYQEE
FEHFQQELDKKKEEFQKGHPDLQGQPADDIFESIGDRELRQVFEGQNRIHLEIKQLNRQL
DMILDEQRRYVSSLTEEISRRGAGTPGQPGQVSQQELDTVVKSQQEILRQVNEVKNSMSE
TVRLVSGIQHPGSAGVYETTQHFMDIKEHLHVVKRDIDSLAQRSMPSNEKPKCPDLPPFP
SCLSTIHFVIFVVVQTVLFIGYIMYRTQQEAAAKKFF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccaggcggaggggtccccaggctggagcgcggtcgttcttctgcgccctg
ttgctgtctttcagccaattcatcgggagcgacggcacgggaggcgaccctgcggctccc
ggcgccgcgggcacccaggccgaattgccacaccgccgtttcgagtacaaatacagcttt
aaggggccgcatctggtgcagagcgatgggaccgtgcccttttgggcccacgcggggaat
gctattccaagtgcagatcagattcgaatagcaccatcgttaaaaagccaaagaggttcc
gtgtggaccaaagcaaaagcagccttcgagaactgggaagtggaagtgacattccgagtg
accggaagaggtcgaattggagccgatggcttagcaatttggtatacagaaaatcaaggc
ttggacggccctgtgtttggatcagctgacacgtggaatggtgttggaatattttttgat
tcttttgacaatgatggaaagaaaaataatcctgctatagtagttataggcaacaatgga
caaatcaattatgaccatcaaaatgatggtgccactcaagctttagcgagttgtcagagg
gactttcgtaataaaccctatcctgtccgagcaaagattacctattaccagaagacactg
acagtcatgatcaataatggctttacaccagataaaaatgattatgaattctgtgccaaa
gtggaaaatatggttatccccacacaaggtcattttggaatatcagctgcaacaggggga
cttgcagatgaccacgacgttctttctttcctgactttccaactgaccgagcctggaaaa
gagccacctacagcagaaaaagacatttcagaaaaagaaaaggaaaagtatcaagaggag
tttgagcacttccagcaagaattagacaagaagaaggaggagttccagaagggccaccct
gacctccaggggcagccagcggatgacatcttcgagagcataggcgatcgggagctgaga
caggtgtttgaaggacagaatcgtattcatctggagatcaagcagctgaaccggcagctg
gatatgattcttgatgaacagaggaggtacgtctcctccctgacagaggagatctccagg
agaggagcagggaccccgggacagcctgggcaggtctctcagcaggaactggacacagtc
gtgaagagccagcaggagattctgagacaagtgaatgaggtgaagaactcgatgagtgag
actgtgcggctggtgagtggcatccagcacccgggctcggcgggcgtctacgagacaacc
cagcacttcatggacatcaaggaacacctgcacgtggtgaagagagatatcgacagcctc
gcacagcgcagcatgccatctaatgaaaaaccaaaatgcccagacctaccaccattcccg
tcgtgtctatccacgatccactttgtgatatttgtagtggtgcagacagtgttgttcatt
ggctatatcatgtacaggactcagcaagaagcagctgccaaaaaattcttttga
DBGET
integrated database retrieval system
