Mus caroli (Ryukyu mouse): 110284795
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Entry
110284795 CDS
T05910
Symbol
Loxhd1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110284795 (Loxhd1)
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110284795 (Loxhd1)
Cilium and associated proteins [BR:
mcal03037
]
Other cilia and associated proteins
Stereociliary proteins
110284795 (Loxhd1)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Other domain-containing proteins
Others
110284795 (Loxhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
RR_TM4-6
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
110284795
NCBI-ProteinID:
XP_021006358
UniProt:
A0A6P5NYR1
LinkDB
All DBs
Position
18:73683280..73784552
Genome browser
AA seq
1815 aa
AA seq
DB search
MVSLRKKRLKKYPWSLWVWTTDLKKAGTNSPIFIQIYGKKGRTDEILLNPNNKWFKPGII
EKFRMELPDLGRFYKIRAWHDRQNPGSGWHLEKMTLMNTINKDKYNFNCNRWLDANEDDN
EIVREMTAEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCR
NNTDLFEKGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWYLDRVLVREEGQPESDNVEF
PCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISVKTGDVSGASTDSRVYIKLYGEKS
DTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGMHAGWFLGSVQIR
VPRQGKQYTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEIEIWTGDVGGAGTTSR
VFVQIYGEEGKTEVLFLCSRSKVFDRGSKDIFQLEAVDVGEIYKIRLGHTGEGFGPSWFV
DTVWLRHLVVQEENLTPEEEARKKKEKDKLRQLLKKERLKAKLQRKKKKKKKGSDEEEEG
DEEEESSSEESSSEEEEEEESEEEEEEEEYGPGMQEVIVQYKFDVNRWLARGKEDNELVV
ELVPAGQSGPEPNTYEVQVITGNVPKAGTDANVYLTIYGEEYGDTGERPLKKSDKSNKFE
QGQTDTFTIYAIDLGALTKIRIRHDNTGNRPGWFLDRVDITDMNNETTYYFPCQRWLAVE
EDDGQLSRELLPVDESYVLPSEDEEGGGQGDNNPLDNLALEQKDKSTTFSVTIKTGDKKN
AGTDANVFITLFGTQDNNGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDN
TGKAPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIVRDLFHAELQTRLYTPFVPY
EITLYTSDVFAAGTDANIFIVIYGCDAVCTRQKFLCTNKREQKLFFERKSASRFIVELED
VGEIIEKIRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLATSEDDKKTIR
ELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDL
GDTGERYLGKSENRTNKFEKGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIW
NDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADV
DIDTVTGPMVDYVQDGPVIPYYVSVTTGKHKEAATDSRAFVLLIGEDDECTNRIWLDYPQ
GKRGFSCGSVEEFYVGGLDVGIIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTE
EVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGMGSRPEWFLERILLKNMNTGDL
TMFYYGDWLSQKKGKKMLVCEICAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIF
GENGDSGTLALKQSANWNKFERNNTDTFNFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYV
DVKDNSRDETFRFQCDCWLSKSEGDRQTLRDFACANNEIRDELEETTYEIVIETGNGGET
RENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIFLGDIASLCVGHLAREDR
FIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKIQS
LVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLET
LELGELRKWCPGWDLLQGVDGKLGLHSGETSGEGEVIKTVYFKQKLINTFFAKKAGLIKL
LRTTPLRELIRAPMC
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctgaggaagaagcggctgaaaaaatatccttggtccctttgggtttggaca
actgatctgaagaaagccggcaccaactcgcccatcttcatccagatttacgggaagaag
ggaaggacagatgagattcttctgaatcccaacaacaagtggttcaagccaggcatcatt
gagaagttcaggatggagctcccagatctcggcaggttctataagattcgggcgtggcat
gataggcagaaccctggctctgggtggcatttagaaaagatgactctgatgaataccatc
aataaggataaatataacttcaattgcaatcgctggctggatgccaatgaagatgacaat
gagatcgtgagggagatgaccgcagaaggcccaactgtgcggaggatcatgggaatggct
cggtatcgtgtgactgtatgcacaggggaacttgaaggtgcaggaactgatgccaatgtc
tacctctgcctttttggtgatgtgggggacacaggggagcggctgctttacaactgcagg
aacaacacggacctgtttgagaaaggcaatgctgacgagtttaccattgaatctgtcact
atgaggaaggtgaggagggtgagggtcagacatgacggcaaaggctctggcagtggctgg
tacctggacagggtgctggtgagagaagagggacaacccgagagtgacaacgtggagttc
ccctgcctcaggtggctggacaaagacaaagatgatggacagctggtccgagagttgctg
cccagtgacagcaatgccacgctcaagaatttccgttatcacatcagcgtgaagactggg
gatgtctctggggccagcacagattctcgggtgtacatcaagctctatggagagaagtct
gacaccatcaagcaggttcttcttgtctccgacaacaacctcaaagactactttgaacgt
ggccgggtagatgagtttactctggagacgctgaacattggaaccatcaacaggctggtg
attgggcacgacagcacgggcatgcatgcaggctggttcctgggcagcgtccagatccgt
gtgccccgccaaggcaagcagtacaccttcccggctaaccggtggctggataagaaccag
gctgatgggcgtctggaggtggagctttatcccagcgaggtggtggagatccagaaattg
gtccactacgagattgagatttggacgggggatgtgggtggcgctggcaccacttcccga
gtcttcgtgcagatctacggggaagaaggcaagaccgaagtcctcttcctctgcagccgt
tccaaagtgtttgatcgggggtccaaggacattttccagctggaagccgtggacgtgggt
gagatctacaagatccgactgggacacacaggcgagggcttcgggcccagctggtttgtg
gacacagtgtggctgcggcacctggtggtgcaggaggagaacctgaccccggaggaggag
gccaggaagaagaaggagaaggacaagctgcggcagctgctgaagaaggagaggctgaag
gctaagctgcagagaaagaagaagaaaaagaagaaaggcagcgatgaggaggaggagggg
gatgaggaagaagagtcctcctcagaggagtcctcatctgaggaagaagaagaggaggag
tcagaggaggaggaggaggaagaggagtatgggccagggatgcaggaggtgattgtgcag
tacaagttcgacgttaaccgctggctggcccggggcaaggaagacaatgaacttgttgtg
gaattggttccggctggccagtctggtcctgaacccaacacctatgaggtccaagtgatc
acagggaacgtgcccaaggctggcaccgatgccaacgtctacctgaccatctacggtgaa
gagtatggggacacaggggagcggcccctgaagaaatcagacaagtccaacaagtttgag
cagggccagacagataccttcaccatctatgccattgacctgggggctcttaccaagatt
cggattcgccatgataacacgggcaacaggccaggctggttcctggacagagtagacatc
accgacatgaataacgagaccacgtactacttcccatgccagcgctggttagcagttgag
gaggatgatggccagctgtccagggagctgctgccagtggacgagtcctacgtgctaccc
agtgaagatgaggagggcggggggcagggtgacaataacccccttgacaacctggctctg
gaacaaaaagataaatctaccacattttccgtgaccataaagactggggacaagaagaat
gcaggcacagatgccaatgtcttcatcacgctctttggcacgcaagataacaacggaatg
accctgctgaagtcctccaaaaccaacagtgacaaatttgaaagggacagcattgaaatc
ttcactgtggagacgctggatctgggagacctttggaaagttaggatcggccatgacaac
acaggcaaggccccaggctggtttgtagactgggtagaggtggatgccccatctcttggg
aagtgcatgacctttccctgtggccgctggctggcaaagaatgaggacgacggcagcatc
gtcagggatctcttccacgcagagcttcagacaaggctttacacaccatttgttccctat
gagatcaccctctacaccagtgatgtcttcgcggccggcacagatgccaacatcttcata
gttatctacggctgcgatgccgtgtgcacccggcagaagttcctgtgcaccaacaagagg
gaacagaagctgttcttcgagaggaagtcggcttcccgcttcattgtggagttagaagac
gtaggtgagatcatagaaaaaattcggattggccatgacaacacaggcataaaccctggg
tggcactgctcccacgtggacatccgcaggctcctccctgagaaagatggcacagaaacc
ttgactttcccctgtgatcgatggcttgccacctctgaggatgacaagaagaccatccga
gaactggtcccttatgacatcttcactgagaagtatatgaaagatggatccttaagacaa
gtctacaaggaagtggaggagcctctggacattgtgctgtactcggtgcagatcttcaca
gggaatgttcctggggcagggacagatgccaaggtctacatcaccatctacggagacctc
ggggacacaggggaacggtaccttggcaagtcagagaaccgcaccaacaagtttgagaaa
ggaacggctgacaccttcatcattgaggccgctgacctgggtgtcatctacaagatcaag
ctccgccatgacaacaccaagtggtgcgccgactggtatgtggagaaggtggagatctgg
aatgacactaacgaggatgagtttctcttcctgtgcgggcgctggctgtccctgaagaag
gaggacgggcggctggagaggctcttctatgagaaggagtacactggagaccgcagtagc
aactgcagcagccctgctgacttctgggagatcgccctgagttccaagatggcagatgtg
gacatcgacacggtgacgggacccatggttgactatgttcaggatggccctgtgattcct
tactacgtgtcagtgaccaccgggaaacacaaggaggcagccactgatagccgtgccttt
gtcttgctcattggggaagacgatgaatgcaccaaccgcatctggctggactatccccag
gggaagcggggcttcagctgtggctctgtggaggagttctacgttggtggcttagatgtg
ggcatcatcaagaaaatagaggtgctttatgaaatgacggtatggactggtgatgtggtc
ggtggaggcactgactccaatatcttcatgaccctctatggcatcaatgggagcacagaa
gaggtgcagctggacaagaagaaggccagatttgagcgggaacaaaatgacaccttcatc
atggagatcctggacattgcccccttcaccaagatgcgcatccgaattgatgggatgggt
agccggccagagtggttcctggagaggatcctgttgaagaacatgaacacaggagaccta
accatgttctactatggagactggctgtcccaaaagaagggaaagaagatgctggtgtgt
gaaatatgtgcagtcattgatggagaggagatgatggagtggacatcttacacagtctcg
gtgaagaccagtgacatcttgggggcaggcacggatgccaatgtgttcatcatcatcttt
ggggaaaatggagacagcgggaccctggccctgaagcagtcagccaactggaacaagttt
gagcggaacaacacagacaccttcaacttttctgacatgctgagcctgggccacctctgc
aaactgagggtctggcacgacaacaaagggatatttcctggatggcacctgagctatgtt
gacgtgaaggacaactcccgtgacgagaccttccgattccagtgtgactgctggctgtcc
aagagcgaaggtgacagacaaacgctccgagacttcgcatgtgccaacaacgagatccgt
gatgagctggaagagaccacctacgagattgtcatagaaacaggcaacgggggcgaaaca
agagagaacgtctggctcatactggagggcaggaagaacagatccaaggagttccttgtg
gaaaattcttccagacagagggcctttcggaaggggactacagacacctttgagtttgac
agcatcttcttgggagacatcgcctccctctgtgtgggccacttggccagggaggaccgg
ttcattcccaagagagagctcgtctggcacgtcaagacgatcaccatcaccgagatggag
tatggcaatgtgtacttctttaactgtgattgcctcatccccctcaagcggaagaggaag
tacttcaaggtatttgaggttacgaaaacgacagagagcttcgccagtaagatccagagc
ctggtgccagtcaagtacgaggtcatcgtgacaacaggctacgaaccaggggcgggtact
gatgccaatgtctttgtgaccatctttggcgctaatggggacaccggcaagcgtgaactg
aaacagaaaatgcgcaacctctttgagaggggcagtacagatcgattctttctggagacg
ttagagttgggagagctgcgcaagtggtgcccaggttgggacttgctgcagggtgtggat
ggaaaattggggcttcactcaggggaaacaagtggagaaggagaggttatcaagacagtg
tattttaagcaaaaactaattaacactttttttgcgaaaaaagctgggctaattaaatta
ttacgaaccacacccctcagagaactcatccgagcacctatgtgctaa
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integrated database retrieval system
