Mus caroli (Ryukyu mouse): 110284808
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Entry
110284808 CDS
T05910
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcal03016
]
110284808
Transfer RNA biogenesis [BR:
mcal03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
110284808
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_HPS5
RAB3GAP2_N
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
110284808
NCBI-ProteinID:
XP_021006377
Ensembl:
MGP_CAROLIEiJ_G0022052
UniProt:
A0A6P5NYS3
LinkDB
All DBs
Position
18:21588532..21622332
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AA seq
830 aa
AA seq
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MVSSVLEVSHVFCCPNRVRGALSWNTGPGGLLAFGTSCSVVLYDPQKKVVITNLNGHTAR
VNCLQWIRTEDGSPSTELVSGGSDNRVIHWELENNQVLKSVRLQGHEGPVYAVHAIYQSG
PSEGEQHALIASAASDSTVRIWSKKGSEVKYLQTLSFRDGFVLSVCLAILPGTNVPVLAC
GDDDCRIHLYVQQDDQFQKALSLCGHEDWIRGVEWATFGRDLFLASCSQDCLIRIWRLYM
KPASYETKDGSLRLKENTFTIKDGGVRTTAAVTLETVLAGHENWVNAVHWQPSFYKDGVL
QQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFGENGTMIIAHAF
HGAMHLWKQSTVNPRQWAPEIVISGHFDGVQDLMWDPEGEFIITTSTDQTTRLFAPWKKK
DQKDRSQVTWHEIARPQIHGYNIKCLAMIDRFQFVSGADEKVLRVFSAPRNFVENFSVIS
RQSLSHMLSDDYDLPEGATVPALGLSNKALFQGDIASQPFEEDELIGPAFGSPQVTFQPA
VLNEPPTEDHLLQNTLWPEIQKLYGHGYEIVCVACNNSKTLLASACKASQKEHAAIILWS
TASWKQVQSLAFHTLTVTQMTFSPDDKFLLAVSRDRTWSLWKRQDVTSAEFDPFFSLFAF
TNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECNSSHNPMEHPIRPCSSILDVG
SSVTAVSVCPVLNPAQRYIVAIGLESGKICIYSWNKTNQEINDWTSCVETNPSQSHSLGI
RRLCWKSCRDDDDGDDDDTEQSEEGPEWLHFASCGEDHTVKIYRVNRRAL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttctgtgctggaggtgtctcatgtgttttgctgcccgaaccgggttcgagga
gctttgagttggaataccgggcccggaggactcctggctttcggcacatcctgctccgtt
gtgctctatgaccctcagaaaaaggtggttattaccaatctgaatggccacaccgctcga
gtcaactgcctgcagtggatacgtacagaggatggctccccttccactgagctggtgtct
ggaggatctgacaatcgggtgattcactgggaactggagaataatcaggttttaaaatca
gtccgtctccaaggccatgaaggacctgtttatgctgtacatgctatttaccagagtggg
ccatccgaaggggagcagcatgccctgatagcttctgcagcttcagattctactgtgcga
atctggtctaaaaaggggtctgaagtcaaataccttcagaccttgagcttcagggatgga
ttcgttctttctgtctgcctggctattttgcctggtactaatgtgccagtattagcatgt
ggtgatgatgactgcagaattcacttatatgttcaacaggatgaccagtttcagaaagcg
ctttctctctgcggacatgaggactggataagaggcgtggaatgggcaacctttggtaga
gaccttttcctagcaagctgctcacaggactgcctaataagaatatggagactgtatatg
aaaccagcatcttatgaaaccaaggatggtagtttaaggctgaaggaaaacacgttcact
ataaaggatggcggtgttagaacaacggctgcggttaccctggagacagtgctggctgga
catgaaaactgggtaaacgcagttcattggcagccttcattttacaaagatggcgttctg
cagcagccagtgagactgctgtctgcctccatggacaaaaccatgattctctgggctcca
gatgaagagtcaggggtttggttagaacaggtccgagtaggtgaagtaggtggaaatacc
ctgggcttttatgattgccagttcggtgaaaatggcaccatgatcatcgctcatgcattc
cacggagcaatgcacctttggaaacagagtaccgtaaacccaaggcagtgggctccagag
attgtcatttcaggacacttcgatggcgtccaagacctgatgtgggatccagagggagag
ttcattatcactaccagcaccgatcagaccactcgccttttcgctccatggaagaagaag
gaccagaaggaccgatcacaggtcacttggcatgagatcgcaaggcctcagatacatgga
tacaacatcaagtgtttggcaatgattgatcggtttcagtttgtgtctggagcagacgag
aaagttcttcgtgttttttctgctcctcggaattttgtggaaaattttagtgtcatttcc
cgacagtcactaagtcacatgctctctgatgactatgatcttccagaaggagccactgtt
cctgcattagggctgtcaaataaagctctctttcagggagacatagcctctcagcccttt
gaggaggatgagctcataggccctgcctttgggtctccccaggtgacctttcagcccgct
gtccttaatgaacctcccactgaggatcaccttctgcagaacaccctgtggcctgagatt
cagaaactgtacggacatggctatgagatagtttgtgtggcctgtaacaattccaagact
ctacttgcctctgcttgcaaggcatctcagaaggaacacgcagctatcattctttggagc
acggcatcttggaaacaagtgcagagtcttgctttccacactttgaccgttacacagatg
accttctcacctgatgacaagttcttactggctgtttccagagatcgaacctggtctttg
tggaagagacaggatgtgacctccgcagagttcgatccattttttagtctctttgcattc
accaacaaaattacttctgtgcatagtagaatcatttggtcttgtgactggagtcctgat
agcaagtacttcttcactggaagtcgagacaaaaaggtggttgtctggggcgagtgtaac
tccagccataaccccatggagcaccccatccgtccctgctcctcgatcctggatgtgggc
agttctgtgacagctgtcagtgtctgccctgtgcttaacccagcccagagatacattgtt
gcaattggattagagagtgggaagatttgtatatactcctggaacaagaccaaccaagaa
atcaatgactggaccagctgtgtagaaacaaatccaagccagagtcacagcctgggtatc
agaaggttatgctggaagagctgcagggatgacgatgacggtgacgatgacgacaccgag
cagagtgaagaggggccggagtggttgcattttgcaagctgtggcgaggaccatactgtg
aagatttacagagttaacagacgcgcactgtga
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