Mus caroli (Ryukyu mouse): 110284896
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Entry
110284896 CDS
T05910
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284896
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284896
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110284896
NCBI-ProteinID:
XP_021006548
Ensembl:
MGP_CAROLIEiJ_G0022163
UniProt:
A0A6P5NTW6
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Position
18:34587817..34591284
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AA seq
829 aa
AA seq
DB search
MLRFLQRRNQSSAFQSFGNSKGLVASTQWDFMEKLEKAHPKRQVIAFIFMMVLVQVCSEP
TIRYSILEETESGSFVAHLAKDLGLGAGELAARSARVVSDDYKQRLLLDPETGDLLLREK
VDREEVCSTVDPCVLHFQVTLEKPVQYFQGELLIQDINDHAPEFPEGEMLLNIPENSQPG
TLLPLNLAQDLDVGSNGLQQYTVSPNSYFHVLTRNNSEGKKYPELVQDRALDREEQAELS
LTLTALDGGSPPRSGTAQVRILMIDINDNAPEFVNSPYEVQVLESSPPDSPVLTVLARDA
DAGNFGRVSYGFFQASDEIQRTFSINKVTGEIRLKKALDFEKNKFYHVKIEAMDGGGLSG
KGLIMVEVVDVNDNAPELTISSLTSSVPENAPETIISIFRVGDRDSGENGKVVCSIPENL
PFILKSTFKNFYTLVTESPLDRESRAEYNITIMVSDLGTPRLTTWHTITVQVSDINDNAP
AFTRTSYTMFVSENNSPALHIGTISATDSDSGSNAHITYSLLPPHDPELPLSSLISINAD
NGQLFALRALDYEALQAFEFHVSATDRGSPSLSSQALVRVVVLDDNDNAPFVLYPLQNAS
APCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRL
LSERDAPKHRLLMLVKDNGDPPRSASVTLHVLLVDGFSQPYLSLPEVAPDPTQEVEDMLT
VYLVIALASVSSLFLLSVVLFVGVKLCRRAREPSLGGCSVPEELFPGHLVDVSGTGTLSH
NYQYEVCLTGDSGTGEFKFLKPMIPNLLVQDAGRELNENLRCRDSFVFS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgttaagattcctccaaagaagaaatcagagttcagcatttcaaagctttggaaattct
aaaggattggttgctagcactcagtgggacttcatggagaagctggagaaagctcaccca
aaaaggcaagtaatcgcttttatttttatgatggttttggttcaggtttgcagtgagcca
acaattcgatactctatcttagaggaaacagaaagtggctcctttgtagcccacctggcc
aaggatctgggtctgggagctggggagctggctgccaggtctgcacgggtggtgtctgat
gattacaagcagagattgctgctggatcctgagactggagatttgcttctgagggagaaa
gtagaccgggaggaggtgtgtagcactgtggatccctgtgtgctgcatttccaggtgact
cttgaaaagccagtgcaatattttcaaggagaattattgatccaggacataaatgatcat
gctccagaatttccagaaggggagatgctattgaatataccagaaaacagccagccgggc
actctgttaccactgaatttagcccaggatttggatgtgggcagcaatgggcttcaacaa
tacacagtcagccccaactcttattttcatgtcctcactcgaaataatagtgagggcaag
aaatacccagagttggtgcaggacagagccctggacagagaggagcaggcagagctgagc
ttaaccctcacagctctggatggagggtctccaccgaggtcaggaacagcccaggttcga
atcctgatgatagacatcaatgacaatgctcctgaatttgtgaacagcccctatgaggtg
caggtcctagagagcagtcccccagactccccagtcctgactgtcttagcacgggatgca
gatgctggcaactttgggagagtttcctatggcttcttccaagcatcagatgaaatccag
agaactttctcaataaacaaagtcacaggagaaatacgactgaaaaaggcattggatttt
gaaaaaaataaattttaccatgtaaaaattgaggccatggatgggggaggactttctggg
aaaggcttgataatggtagaggtggtggatgtgaacgacaatgccccagagctgaccata
tcttcactgaccagctctgtcccagaaaatgctcctgagacgatcataagcatcttcaga
gttggagacagggattccggagagaatggaaaggtggtttgttctattccagagaatctg
ccattcattctaaaatccactttcaagaatttctacactctggtgacagagagccctctg
gacagagagagcagagctgagtacaacatcaccatcatggtctccgacctgggcacaccc
aggctcacaacatggcacaccataacggtgcaggtgtccgacatcaacgacaatgccccc
gccttcacccgaacctcctataccatgtttgtcagcgagaacaacagccctgccctgcac
ataggcaccatcagtgccacagactcagactcaggctccaatgcccacatcacctactcg
ctgctgccgccccatgatccggagctgccactctcctcgttaatctccattaacgcagac
aacgggcagctatttgcactcagggcgctggactacgaggcgctgcaggccttcgagttc
cacgtgagtgcgacagaccgaggctcaccctcgctcagcagccaggctctggtgcgtgtg
gtggtgctggatgacaatgacaatgcgcccttcgtgctctacccactgcagaacgcctct
gcaccctgcacagagctgctgcccagggcagcagagcctggatacctggtcaccaaggtg
gttgcagtggaccgcgactctggtcagaatgcctggctgtcatttcagctgctcaaagcc
acggagcccgggttgttcagcgtgtgggcgcacaatggcgaggtccgcaccaccaggctg
ctgagtgagcgagatgcacccaagcacaggctgctgatgctggtcaaggataatggcgat
cctccgcggtctgccagtgtcactcttcatgtgctgttggtagatggcttttcccagcca
tacctctctctgcctgaggtggcgcctgaccccacacaggaagttgaagatatgctcact
gtgtacctggtcattgccttggcatctgtatcttctctcttcctcttgtctgtggtgctt
ttcgtgggggtaaagctgtgcaggagggccagggaaccctctctgggtggctgctctgtg
cctgaggaactctttcctggccacctggtggatgtcagtggcacagggaccttgtcccac
aactaccaatatgaggtgtgtctgaccggggactctgggactggtgagttcaaattcctc
aaacccatgatccccaacctgttggttcaggacgctgggagagaacttaatgaaaatctt
cgctgcagggatagctttgtattcagttaa
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