Mus caroli (Ryukyu mouse): 110284897
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Entry
110284897 CDS
T05910
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284897
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284897
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
110284897
NCBI-ProteinID:
XP_021006549
Ensembl:
MGP_CAROLIEiJ_G0022165
UniProt:
A0A6P5P2M0
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All DBs
Position
18:34625406..34628452
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AA seq
828 aa
AA seq
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MSNTVKIPPKRGTEFSVSKHLETATGLDASMHFLIMEKLGRMHLNRQVMAFIFVMVLVQV
CSEPTIRYSILEETESGSFVAHLAKDLGLGSRELAARSARVVSDDYKQRLLLDPETGDLL
LREKVDREEVCSTVDPCVLHFQVTLEKPVQYFQGELLIQDINDHAPEFPDRELLLRIPEN
SQPGTQFSLNLAQDLDVGSNGLQQYTVSPNPYFHILTRNNSKGKKYPELVQDRGLDREEQ
AELSLTLTALDGGSPPRSGTALVRILIMDINDNAPEFVNSPYEVQVLESSPPDSPVLTVL
ARDADAGNFGRVSYGFFQASDEIQQTFSINATTGDMRLKKKLDFEKIKSYHVEIEAIDGG
GLSGKGSVTIEVVDVNDNAPELTISSLTSSVPENAPEMIISIFRVGDRDSGENGKMVCSI
PENLPFILKSTFKNFYTLVTESPLDRESRAEYNITIMVSDLGTPRLTTQHTITVQVSDIN
DNAPAFTQTSYSMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPHDPELALSSLIS
INADNGQLFALRALDYEALQAFEFHVGATDGGSPPLISQALVRVVVLDDNDNAPFVLYPM
QNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSMWAHNGEVH
TTRLLSERDAPKHRLLLLVKDNGEPQRSASVTLQVLLVDGFSQSYLPLPEVAQDRAHEDE
DVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAREISLDGCSMPGEHFPGHLVDISGAG
TLSQSYQYEVCLRGDSGTGEFKLLKPMIPNAGIEIMESPHCRDSFVFN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacggtgaagattcctccaaagaggggaacagaattcagtgtttcaaagcat
ttggagactgctacaggattggatgcaagcatgcatttcctcatcatggagaagctgggg
agaatgcacctaaacaggcaagtaatggcgtttatttttgtgatggttttggttcaggtt
tgcagtgagccaacaattcgatactctatcttagaggaaacagaaagtggctcttttgta
gcccacctggccaaggatctgggtctgggatctagggagctggctgccaggtctgcacgg
gtggtgtctgatgattacaagcagagattgctgctggatcctgagactggagatttgctt
ctgagggagaaagtagaccgggaggaggtatgtagcactgtggatccctgtgtgctgcat
ttccaggtgactcttgaaaagccagtgcaatattttcaaggagaattattgatccaggac
ataaatgatcatgctccagaattcccagatagagaactgctcttgagaataccggagaac
agccagccaggcacacaattttcactgaatttagcccaggacttggatgtgggcagcaat
gggcttcaacaatacacagtcagccccaacccttattttcatatcctcactcgaaataat
agtaaaggcaaaaaatacccagagttggtgcaggacagaggcctggacagagaggagcag
gcagagctgagcttaaccctcacagctctggatggagggtctccaccgaggtcaggaaca
gccctggttcgaatcctgatcatggacatcaatgacaatgctcctgagtttgtgaacagc
ccctatgaggtgcaggtcctagagagcagtcccccagactccccagtcctgactgtctta
gctcgggatgcagatgctggcaactttgggagagtttcctatggcttctttcaagcatca
gatgaaatccaacaaacattctcaataaacgcaactactggagacatgcgattgaaaaag
aaattggattttgaaaaaattaaatcttaccatgtggaaatcgaagccatagatggaggt
gggctttctgggaaaggctctgtaacgatcgaggtggtggatgtgaacgacaatgcccca
gagctgaccatatcttcactgaccagctctgtcccagaaaatgctcctgagatgatcata
agcatcttcagagttggagacagggattccggagagaatggaaagatggtttgttctatt
ccagagaatctgccattcattctgaaatccaccttcaagaatttctacaccctggtgaca
gagagccctctggacagagaaagcagagctgagtacaatatcaccatcatggtctccgac
ctgggcacacccaggctcacaacccagcacactataacagtacaggtgtctgacatcaac
gacaacgcccccgccttcacccaaacctcctacagcatgtttgtccgcgagaacaacagc
cccgccctacacataggcaccatcagtgccacagactcagactcaggctccaatgcccac
atcacctactcgctgctgccgccccatgatccggaactggccctctcttcgttaatctcc
attaacgctgataatgggcagctgtttgctctcagggcgctggactatgaggccctgcag
gccttcgagttccacgtgggcgccacagatggaggctcacctccactcatcagccaggct
ctggtgcgcgtggtggtgctggatgacaatgacaatgcgcccttcgtgctctacccgatg
cagaacgcctcggctcccttcactgagctgctgcctagagctgcggagccaggctacctg
gtcaccaaggtggttgcagtggaccgcgactctggccagaatgcctggctatccttccag
ttgctcaaggccacggaacctgggctgttcagcatgtgggcacacaatggagaggtgcac
accaccaggttgttgagtgagcgtgatgcacccaagcacaggctgctgttgctggtcaag
gacaatggagagcctcagcgctctgccagtgtcactctgcaggtgctgctagtggatggc
ttctcacaatcctacctacctcttccagaggtagcacaggatcgcgcccatgaagatgag
gacgtgcttacgttgtacctggtcatagccttggcatctgtgtcttctctcttcctcctc
tctgtgctgctgtttgtgggggtaagactgtgcaggagggccagagagatctctctggat
ggctgctctatgcctggtgaacactttcctggccacttggtggatatcagtggagcaggg
accctgtcccaaagctaccagtatgaagtgtgtctgaggggcgactctgggactggtgag
ttcaagttactgaaacccatgatccccaatgctgggatagaaattatggaaagtccccac
tgcagggatagctttgtattcaactaa
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