Mus caroli (Ryukyu mouse): 110284899
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Entry
110284899 CDS
T05910
Name
(RefSeq) protocadherin beta-8-like
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284899
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284899
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110284899
NCBI-ProteinID:
XP_021006551
Ensembl:
MGP_CAROLIEiJ_G0022172
UniProt:
A0A6P5NZ68
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Position
18:34698135..34702766
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AA seq
802 aa
AA seq
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MEASRKLICRQRQVLFFFLLLGFPLTTAGELRRYSVVEEKEDRSFVTNLVKDLGLGQLEL
SRRGAKVISKGNKLHLQLNQKTGDLLLNEKMDREKLCGHTEPCLLSFQVLLDNPLDIFQA
ELEVTDINDHSPEFLDKEIMLKISESSLPGATFPLKSAQDMDVGQNGIDNYLVSSNSYFR
VLTRKRSDGKKYPELVLDRALDREEEAELRLTLTAQDGGSPPRSGTTEVHIEVLDINDNA
PQFEQFFYRVQIPEDSPIGFLIITVSATDKDIGVNGEISYSLFQVSDDISKTFSIHPLTG
EVRLKDHLDFEKTQSYEFNIEARDAGTFSGKCTILAQVMDVNDHAPEIILSAFTNSIPEN
LPETMVAVFSVSDLDSGENGKISCSIQDDLPFFLKPSGENFYTLLSQKPLDRETVAEYNI
TITVADMGSPILKTQVNLTVQVSDINDNAPIFTQASYTMFIRENNSPALHIGTISATDSD
SGSNAHITYSLLPPHDHQLALASFISINADNGQLFVLRALDYEALQAFEFHVGATDGGSP
ALSSQALVRVVVLDDNDNAPFVLYPMQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQN
AWLSFQLLKATEPGLFSVWAHNGEVRTSRLLSEREVPKHRLVLLVKDNGDPPRSASVTLH
VLLVDGFSQPYLPLPEVARDPDHEDSELTLYLVIALASVSSLFLVSVLLFVGVRLCRRAR
EVSLGGCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKYLKPILPNFQDHS
LRPEMGENPNSRNDWSFGIQLK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaggaagctcatttgcagacaaaggcaagtcctgtttttctttctccta
ttaggcttccctctaacgactgcaggggaactgaggcgctattctgtggtggaggaaaag
gaggataggtcctttgtaaccaatttagtaaaagacctgggtcttgggcagctggaactc
tcccggagaggagctaaggtcatttctaaaggtaacaaactacatttgcagctgaatcag
aagacaggggatttgctgttaaatgagaaaatggacagggaaaaactttgtgggcataca
gagccatgcttgctaagcttccaagtgttgctagacaaccccttggatatttttcaagct
gagctagaagtcacagacataaatgaccactctccagaattcctggacaaagagatcatg
ctaaagatatcagaaagcagtcttcctggagctacatttcctctgaagagtgctcaggac
atggatgtaggccaaaacggcattgacaactatctggtcagttccaattcctattttcgt
gtgctcactcggaaacgcagcgatggcaagaaataccctgaactggtactagatagagca
ctggatagagaggaggaagctgagctcaggctaaccctcacagcgcaggatggcggctct
ccgcctaggtctggaactactgaagtccacattgaagtcctggacatcaatgataatgct
cctcaatttgagcagtttttttatagggtgcagatccctgaggacagtccaataggcttt
ctgatcatcactgtctctgctacagacaaggacattggagtcaatggagagatctcctat
tcacttttccaggtttcagatgatattagcaaaacattttcaatccaccccttgacaggg
gaagtacgattgaaagatcaccttgattttgaaaagactcagtcctatgaattcaatatt
gaagcaagagatgctgggaccttttctggaaaatgcacgattctggcccaagtcatggat
gtgaatgaccatgctccagagattatcctgtctgcatttaccaactccatccctgagaac
ttaccagaaactatggtggcagtttttagcgtttctgatctagattcgggagaaaatggg
aaaataagttgttccattcaggacgatctacccttcttcctaaagccttctggggaaaac
ttttatacgctgttatcacaaaaaccactggacagagagactgtagcagaatacaacatc
accatcaccgttgcagacatggggagtcccatcctgaaaacacaagtcaacttaacagtg
caggtctctgacatcaacgacaacgcccccatcttcacccaagcctcctatacaatgttc
atccgcgagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagac
tcaggctccaatgctcacatcacctactcgctgctgccgccccacgaccaccagctggcc
ctcgcctcgttcatctccatcaacgcagacaatgggcagctgttcgtgctcagggcactg
gactatgaggccctgcaggcctttgagttccatgtgggcgccacagacggaggctcaccc
gcactcagcagccaggcactggtgcgcgtggtggtgctggacgacaatgacaacgcaccc
ttcgtgctctacccgatgcagaacgcctctgcaccctacactgagctgctgcccagggcg
gcggagcccggttacctggtcaccaaggtggtggctgtggatcgtgactctggccagaat
gcctggctgtcattccagctgctcaaagctacggagcccgggctgttcagcgtgtgggca
cacaacggtgaggtacgtacctccaggctgctgagcgagcgcgaagtgcctaagcacagg
ctggtactgctagtcaaggacaatggtgatcctccgcgctctgccagtgtcacactgcat
gtgctgctggtggatggcttctctcagccctacctgcctctgcctgaggtggcgcgtgat
cctgaccatgaggacagtgagctcacattgtacctggtcattgccttagcttctgtgtct
tctctcttcctggtgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccagg
gaggtctctctgggtggctgctctgtgcctgagggacactttcctggccacctggtggat
gtcagtggcacagggaccctgtctcagagctaccaatatgaggtgtgtcttaccggagac
tctgggactggtgagttcaaatatctgaaaccaattttacctaattttcaagaccattct
cttagaccagaaatgggtgaaaatcccaactctaggaacgactggagttttggtattcag
ttaaaataa
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