KEGG   Mus caroli (Ryukyu mouse): 110284901
Entry
110284901         CDS       T05910                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mcal04515]
    110284901
Cell adhesion molecules [BR:mcal04515]
 Cadherins
  Protocadherins
   110284901
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4
Other DBs
NCBI-GeneID: 110284901
NCBI-ProteinID: XP_021006554
Ensembl: MGP_CAROLIEiJ_G0022173
UniProt: A0A6P5NTX0
LinkDB
Position
18:34705826..34709614
AA seq 799 aa
METAWMCNLRQRQVLAFFVLLHVSGAGAELGPYSIEEETERGSFVANLGKDLGVELAEIS
SRRARIISQENKEHLQLNLQSGDLLINEKLDREELCGPIEPCVLHFQVLMENPLEVFQAE
LRVMDINDYSPVFSEREMILRIPENSALGDTFPLNNALDSDVAINNIQTYRLSSNSHFLV
VTRNRSDGRKYPELVLEKELDREEEPELRLTLTALDGGSPPRSGTAQVLIEVVDINDNAP
KFQQPTYRVQIPENSPTGTLVLTVSANDLDSGDYGKVLYTLSQPSEDISKTLEVNPVTGE
IRLLKEVDFETIPSYEVDIKATDGGGLSGKCTLLLKVVDVNDNAPEVMLSALTSPVPENS
PDEVVAVFSVKDPDSANNGKMIASIEEDLPFLLKSSGKNFYTLVTKRALDREDREQFNIT
ITVSDLGTPRLTTQHTITVQVSDTNDNAPAFNQTSYTLFVRENNSPAMHIGTISATDSDA
GSNSHITYSLLPSHDPQLALDSLISINADNGQLFALRALDYEALQVFEFHVGAIDQGSPA
LSSQALVRVVVLDDNDNAPFVLYPMQNFSAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVLLVKDNGDPPRSASVTLHV
LVVDGFSQPYLPLPEVARNPAHDEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLSGYSVPEGHIPGHLVDVRGVGTLSQSYQYDVCLMGDSSGTSEFNFLKPVLPSSLDQC
SGKETEGNSSIHNSFGFYH
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggagactgcatggatgtgcaatctgagacaaaggcaagtcctggctttctttgttttg
ctgcatgtgtctggggcaggggcagaactgggtccctattccatagaggaagaaacagag
aggggctcctttgtggcaaatcttgggaaagatctgggggtggaactggcagagatatcc
agtcgcagggctcggatcatttcccaggaaaacaaagagcatttgcagctcaaccttcaa
tctggagatttgctcataaatgagaaactggaccgagaggagctatgtggccccattgag
ccttgtgttctacacttccaagtgttaatggaaaaccctttagaggtatttcaggctgaa
ctgagggtgatggacataaatgactattctccggtgttcagtgaaagagaaatgatactg
agaataccagaaaacagtgctctgggagatacattccctttaaataatgctctggactca
gacgtagcaatcaacaatatccagacctataggctcagctcaaactctcatttcctggtt
gtaacccgcaaccgcagtgatggcaggaagtacccagagctggtgctggagaaagaactg
gatcgagaggaggaacctgagctgagattaactctgacagctttggatggtggctcccct
ccccggtctgggacagctcaggttctcattgaagtagtggacatcaacgataatgcaccc
aagtttcagcagccaacataccgagtgcaaattcccgagaacagccccacgggtactctg
gtactcacagtctcagccaatgacttggacagtggagattatggaaaagtattgtataca
ctttctcagccttcagaagatattagcaaaacgttagaagtaaaccctgtaaccggggag
attcggctattaaaagaggtggattttgaaacgattccctcgtatgaagtggatatcaag
gccacggatgggggaggtctctcgggaaaatgcacgctgttactgaaggtggtggacgtg
aatgacaatgccccagaagtgatgctatctgctcttaccagcccagtcccagaaaactcc
ccggacgaggtagttgctgttttcagtgttaaagatcctgattcagcgaacaatggaaaa
atgattgcctccatcgaagaagacctcccctttcttctaaaatcttcaggaaagaacttt
tacactttagtgaccaagagagcacttgacagggaagacagagagcaattcaacatcacc
atcactgtctctgacctgggcacacccaggctcacaacccagcacaccataacagtgcag
gtctctgacaccaatgacaacgctcccgccttcaaccaaacctcatacaccctgttcgtc
cgcgagaacaacagccccgccatgcacataggcaccatcagtgccacagactctgacgct
ggctccaattcccacatcacctactcgctgctgccttcccacgacccgcagctggccctg
gactcgctcatctctatcaacgcagacaatgggcagctgttcgcgctcagagctctggac
tatgaggccctgcaggtctttgagttccacgtgggtgcaatagaccaaggctcgcccgcg
ctcagcagccaagcgctggtgcgcgttgtggtgctggacgacaatgacaatgcacccttc
gtgctctacccgatgcagaacttctctgcgccttgcacagaactgctgcccagggcggcg
gaacccggatacctggtcaccaaggtggtagctgtggaccgcgactctggccagaatgcc
tggctgtcattccaactgctcaaggccacggagcccgggctgttcagcgtgtgggcacac
aatggcgaggtgcgcactaccaggctgctgagcgagcgcgatgtgcccaagcacaggctg
gtcctgctggtcaaggacaatggcgatcctccgcgctctgccagcgtcacgctgcacgtg
ctagtggtggatggcttctctcagccctacctgcctctgccagaggtggcgcgcaatccc
gcgcacgatgaggacgctctaacactgtatctggtcatagccttggcatctgtgtcttct
ctcttcctcttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagagccagggcg
gcctctctgagtggttattccgtgcctgagggccacattcctggccatctggtggatgtc
agaggtgtggggaccctgtcccagagctaccagtatgatgtatgtctgatgggcgattct
tctgggaccagtgagtttaacttcttaaagccagttctccctagttctctagaccagtgc
tctggtaaagaaacagagggaaattcctcgatccacaatagttttggattttatcattaa

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