Mus caroli (Ryukyu mouse): 110284907
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Entry
110284907 CDS
T05910
Name
(RefSeq) protocadherin-3
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284907
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
110284907
NCBI-ProteinID:
XP_021006562
Ensembl:
MGP_CAROLIEiJ_G0022168
UniProt:
A0A6P5NTX5
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Position
18:34660465..34664052
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AA seq
796 aa
AA seq
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METALAKMPQQRQVFFLTTLLLLWKYGSGAIRYSMPEEMESGYLVANMAKDLGLRVGELA
TRGAQIHYKGNKELLQMDAETGNLFLKEKLDREALCGATETCVLHFQIILENPVQFFQTE
LQLTDINDHSPAFSDKEMLLTISESANPGTVFPLKAAQDSDIGSNAVQNYTLSPNLHFHV
VTLSRSDGRKYPELVLDRALDREEQPELALILTALDGGSPPRSGTTEVHIEVVDINDNAP
QFIQSLYEVQILENSPLDALVVTVSAKDLDAGIHGTVTYSLFQGGELSQPFVIDKITGEI
RLKGALDFEATPYYNMEIVATDPGGFSGKCTVAIQVLDVNDNPPELMIRKLTVPVPENSA
ETMVAVFSVSDSDSGDNGRIVCSIQNDIPFLLKPTYENYYTLVTEGPLDRERRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTLFVQENNSPALHIGTISATDSDSG
SNAHITYSLLPPQNSQLALASLVSINSDNGQLFALRAMDYEMLQAFEFHVDATDGGSPAL
SSQALVRVVVLDDNDNSPFVLYPMQNASAPCTELLPRAAEPGYLITKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHKLLLLVKDNGDPMRSASVTLHVL
VVDGFSQPYLPLAEVTRDSTEDDYDVLTLYLVVALASVSSLFLLSVLLFVGVRLCRRARA
ATLGDYSVPEGHFPGHLVDVSRAGTLSQSYQYEVCLNGGTGTNEFNFLKPLFPILPTQAA
AEERENAVVRNSVEFY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaatgccacagcaaaggcaagtcttttttcttactacattg
ttgctactgtggaaatatggctctggggcaattagatattccatgccagaagaaatggag
agtggctatttggtggcaaacatggcaaaagatctggggctcagggttggagaactggcc
actagaggagctcaaatccattacaaaggaaacaaagagctcttgcagatggatgcagag
actgggaatttgttcttaaaggaaaaactagaccgggaggcactgtgtggggcgacagaa
acctgtgtgctgcacttccagatcatactggaaaaccctgtgcagttcttccaaactgaa
ctgcagctcacagatataaatgaccactctccagcattctctgacaaggaaatgcttcta
acaatttctgagagcgccaatccagggactgtgtttcctctgaaggcagctcaggactct
gacatagggagcaacgctgttcagaactacacactcagccccaacctccatttccatgtg
gttactctcagtcgctcagatggcaggaaatacccagagctggtgctggacagagcccta
gacagggaggaacaacctgagctcgctttaatcctcaccgctctggatggcggatcccca
cccaggtcaggaaccaccgaagttcacattgaagtcgtggacatcaatgataacgccccc
cagtttatacagtcactctatgaggtacagattcttgaaaatagccctcttgatgcctta
gttgtcacggtctctgccaaggatttagatgctggaatacatggtactgtaacctactct
ctgtttcaaggtggtgaactatctcaaccatttgtaatagacaaaatcacaggagaaatt
cgccttaaaggggcactggattttgaggcaactccgtattataacatggaaattgtagct
acagacccaggaggcttttcaggaaagtgcactgtagcaatacaggtgttggacgtgaat
gacaaccccccagagttgatgatcaggaagctcacagtccctgtcccagaaaattctgca
gagactatggttgctgtcttcagtgtttctgattctgattcgggggacaatggaaggata
gtgtgttctattcagaatgatatcccatttctcctgaaacccacatatgaaaattattat
actttagtaactgagggaccacttgatagagagagaagagctgaatacaacatcaccatc
actgtctctgacctgggcacacccaggctcacaacccagcacaccataacagtgcaggtg
tctgacatcaatgacaacgcccccaccttcacacaaacctcctataccctgtttgtgcaa
gagaacaacagccccgctcttcacattggtaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgcctccccaaaactcacaactggccctcgcc
tcgctagtctccatcaattcagacaatgggcagctgtttgcgctcagggcgatggactat
gagatgcttcaggccttcgaattccacgtggatgccacagatggaggctcacctgcgctc
agcagccaggccctcgtgcgtgtggtagtgctagatgacaatgacaattcacctttcgtg
ctctacccgatgcagaatgcctcagcaccctgtacggagctattgcccagggcagcagag
ccgggatacctgatcaccaaggtggtggctgtggatcgtgactctggccagaatgcctgg
ctgtcgttccagctgctcaaggctacagagccagggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagtgagcgtgatgctccaaagcacaagctcttg
ctgctggtcaaggacaatggcgatcccatgcgctctgccagcgtcactcttcacgtgcta
gtggtggatggcttctcgcagccttacctgccattggcagaggtgacgcgggattccacg
gaggacgattatgacgtgctcacgctgtacctagtcgttgccttggcatctgtatcttct
ctctttctcttgtctgtgctgttgtttgtcggagtgaggctgtgcaggagggccagggca
gccaccctgggtgactactcagtacctgagggacactttcctggccacttggtggatgtc
agtagagcagggaccctgtcccagagctaccaatatgaggtgtgtcttaatggaggtact
ggaacaaacgagttcaactttcttaaaccattgtttcctattcttccgacccaggctgct
gctgaagaaagagaaaatgctgttgtgcgcaatagtgttgaattctattag
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