Mus caroli (Ryukyu mouse): 110284912
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Entry
110284912 CDS
T05910
Name
(RefSeq) protocadherin beta-8-like
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284912
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
110284912
NCBI-ProteinID:
XP_021006567
Ensembl:
MGP_CAROLIEiJ_G0022160
UniProt:
A0A6P5NTX9
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Position
18:34553560..34556135
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AA seq
784 aa
AA seq
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METALAKRSQQRQVVFLTMLLLLCVSGSEAIKYSMPEETESGYLVANLAQDLGIRVGELA
AREARVHHRGIKDLLQLDAETGNLFLKEKLDREVLCGATEPCVLHFQIILKNPVQFFQTE
LQLTDINDHSPEFPDMEMLLTIPESAQPGTVFPLKAAQDPDIGSNAVQNYTVSPNLHFHV
ITLSRSDGRKYPELVLDRALDREEQPELTLILMALDGGAPRRSGMTTVHIEIMDINDNAP
QFVQSLYEVQVPENFPLDALVVTVSARDLDAGIYGNIAYSLFQGDGDSQPFVINEITGEI
RLSKKLDFEVTPYYNVEIAAADGGGLSGKCTVAVQVLDVNDNAPELTISTLSSPIPENSP
ETVVAVFGVFDPDSGDNGRMVCSIQNELPFLLKSTFENYYTLATERPLDRESIAEYNITI
TVSDMGTPRLATQHTIKVQVSDINDNAPAFTQTSYTLFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPSQDPQLALSSLISINADNGQLFALRALDYEALQAFEFRVGATDGGSPAL
SSQTLVRVVVLDDNDNAPFVLYPLQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLLLVKDNGEPLRSASVTMHVL
VVDGFSQPYLPLPEVALDPTREEDNLTLYLVISLASVSSLFLLSVLLFVGVRLCRRAREA
SLGGCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLSGDSGITDFKFLKPSIPNSLIPDNY
MLNS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaagatcacaacaaaggcaagttgtttttcttactatgctg
ttgcttttgtgtgtgtctggttcagaggcgattaaatattccatgccagaagaaacagag
agtggctacttggtggctaacctggcacaagatctggggatcagggttggggaactggca
gctagagaggcacgagtccatcacagaggaatcaaagacctcttgcagctggatgcagag
acaggaaatctgttcttgaaggaaaaattagaccgtgaggtgctgtgcggggcgacagaa
ccctgtgtgctgcacttccagatcatactgaaaaaccctgtgcagttctttcaaactgaa
ctgcagctcacagatataaatgaccactctccggagttccctgacatggaaatgctccta
acaatccctgagagcgcccagccagggactgtgtttcctctgaaggcagctcaggaccct
gacatagggagcaacgctgttcagaactatacagtcagtcccaacctccatttccatgtc
attactctcagtcgctcagatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgagctcactttaatcctcatggctctggatgggggagctcca
cgaaggtctgggatgaccacagttcatattgaaatcatggacatcaatgacaatgctccc
cagtttgtacaatcgctctatgaggtgcaggttcctgagaatttcccccttgatgcctta
gttgtcacagtctctgccagggatttagatgctgggatatatggcaatatagcctactct
ctgtttcaaggtgatggagactcccaaccatttgtaataaatgaaatcacaggagaaatc
cgtctaagcaaaaagttggattttgaagtaactccatactataatgtggaaatcgcagct
gcggatggagggggactttcaggaaaatgcactgtagctgttcaggtgttggatgtgaat
gataatgctccagagttgacgatctctacgctctcaagccctatccccgaaaactcccca
gagactgtcgttgctgtgtttggtgtttttgacccggattctggggacaatgggaggatg
gtgtgctctattcagaacgaacttccatttcttttaaagtccacatttgagaactattat
actttagcgacagagaggccactggatagagagagtatcgctgagtacaacatcaccatc
actgtctcagacatgggcacacccaggctcgcaacccagcacactataaaagtgcaggtg
tctgacatcaacgacaacgcccccgccttcacgcaaacctcctacaccctgtttgtccac
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tctaatgcccacatcacctactcgctgctgccgtcccaggaccctcagctggccctctcc
tcgctcatctccatcaacgctgacaacgggcagctgtttgcgctcagggcattggattat
gaggccctgcaggccttcgagttccgcgtgggcgccacagatggaggttcgcccgcgctc
agcagccagactctggtgcgcgtggtggtgctggatgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcttctgcgccctacactgagctgctgcccagggcggcggag
cctggatacctggtcaccaaggtggtggcagtggaccgcgactctggccagaatgcctgg
ctgtcatttcagctgctcaaggctacggagcctgggttgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagtgagcgagatgcacccaaacacaggctgctg
ttgctggtcaaggacaatggagagcctctgcgctctgccagcgtcacaatgcacgtgcta
gtggtggatggcttctctcagccctacctgcccctgccagaggtggcgctggatcctaca
cgggaagaagataatctcacgctgtatcttgtcatctctttggcatctgtgtcttctctc
ttcctcttgtccgtgctactgttcgtgggggtgaggctgtgcaggagggccagggaggcc
tctctgggaggctgctctgtgcctgagggacactttcctggccacctggtggacgtcagc
ggggcagggaccctgtcccagagctaccagtatgaggtgtgtctgagcggagactctggg
attacagattttaagttcctgaagcccagcattcccaacagtctgattccagacaattac
atgttgaatagttaa
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