Mus caroli (Ryukyu mouse): 110284913
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Entry
110284913 CDS
T05910
Symbol
Pcdhb3
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284913 (Pcdhb3)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284913 (Pcdhb3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110284913
NCBI-ProteinID:
XP_021006569
Ensembl:
MGP_CAROLIEiJ_G0022159
UniProt:
A0A6P5NWU0
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All DBs
Position
18:34546618..34550637
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AA seq
781 aa
AA seq
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MEAREERFLKQRQVLLLFVFLGGSLAGSRSRRYSVAEEKEKGFVIANLAKDLGLSIEELA
ERRAQAISKGNIQYFQLSHQTGDLLLVEKLDREELCGSTEPCVLHFQVLLHDPLQFITNE
LEVIDVNDHAPEFFENAMQLKVLENSVPGTVIPLGNAVDLDVGRNGLQNYTVSPTSHFHV
HTRRRRDGRKYPELVLDRALDREEQSEISLTLTALDGGSPPRSGTTQVHILVLDTNDNAP
EFTQSLYEVQILETSPIGSVITTVSASDLDMGNFGAISYVFFHASEEILKTFQLNSSTGN
IQLLKGLDYETINTYEVDVEAKDGGGLSGKCTVIVQVLDVNDNPPELTLSSVNSLIPENS
AETVVAVFSVSDLDSGDNRRVTCSIQNDLPFILKPSVENFYTIASEGALDRESRAEYNIT
ITVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTMFVRENNSPALHIGTISATDSDS
GSNAYITYSLLPPHDPQLVLDSLISINADNGQLFALRALDYEVLQAFEFHVGATDRGSPA
LSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKSTEPGLFSVWAHNGEVRTARLLSERDMLKQKLLLLVKDNGEPPRSASVTLNV
LLVDGFSQPYLPLPEVARESVQNDVDLLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAR
AACCSVPEGHFPGHLVDVSGMGTLSQSYQYEVCLTGDAGTGEFKFLNPVIPNLFLEESER
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagagaggaacgctttcttaaacaaaggcaagtcttgcttctctttgttttt
ctgggtgggtctcttgctgggtccaggtctcggcgctattctgtggcggaggaaaaggag
aagggctttgtaatagccaatctagcaaaggatctggggcttagtatagaagaactggct
gaaaggagagctcaagctatctccaaagggaacatacagtattttcagctcagtcatcag
accggagatttgctcttggttgagaaattggaccgggaggagctgtgcggctcgacagag
ccttgtgtgctgcactttcaggtgttgctgcatgatcctttgcagtttattacaaatgag
ctcgaggtcatagatgtaaatgaccatgccccggagttctttgaaaatgcaatgcagctg
aaagtcctggaaaactccgtgcctgggacagtaattcctttgggaaatgcggtggacctg
gatgtgggaagaaacggactccagaactacacggtctctcccacgtctcattttcatgtt
cacacccgacgtcgcagggatggaaggaagtatccagaactagttctagacagagctctg
gatcgggaagagcagtcagagatcagtttaactctcacagccctggatggaggatccccg
cctcgttctggaactacccaggtccatatcctggtcttagacacaaatgataatgcccca
gagtttacacagtcactctacgaggttcaaattttagagacaagccctattggctctgtc
attaccactgtctctgcctctgacttagatatggggaattttggtgcaatatcatatgta
ttttttcacgcttctgaagaaattctcaaaacttttcaactgaactccagtactggtaat
atacaactacttaagggtttggattatgaaacaattaatacctatgaggttgacgtagag
gccaaggatggtggaggcctttcagggaaatgcacagtcatagttcaggtacttgatgtg
aacgataacccaccagaactgaccctgtcatcagttaacagtcttatccccgagaattca
gcagagactgtggtggctgttttcagtgtttctgatttagactctggagacaacagaaga
gtgacatgttccatccagaacgacctccccttcatcttgaaaccatctgtagagaacttc
tatactatagcgtccgaaggggctttggacagagaaagcagagctgagtacaacatcacc
atcacagtctccgacctgggcactcccaggctcacaacccagcacaccataacagtgcag
gtgtctgacatcaacgacaacgcccccaccttcacccaaacctcctacaccatgttcgtc
cgtgagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgcctacatcacctactcgctgctgccgccccacgacccacagctggtcctc
gattcactcatctccatcaatgctgacaacgggcagctgttcgcgctcagggcgctggac
tatgaggtcctgcaggccttcgagttccacgtgggtgccacagaccgaggctcacctgca
ctcagcagccaggctctggtgcgcgtggtggtgctggatgacaatgacaatgcgcccttc
gtgctctacccactgcagaacgcttctgcgccctgcactgagctgctgcccagggcggcg
gagcctggatacctggtcaccaaggtggtggcagtggaccgcgactctggccagaatgcc
tggctgtcattccagctgctcaagtccacagagcccgggttgttcagcgtgtgggctcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgatatgctcaagcaaaagctg
ctgttactggtcaaggacaatggagagcctccgcgctctgcaagtgtcaccctgaatgtg
ctgttagtggatggcttttctcaaccctacctgcctttgcctgaggtggcgcgcgagtcc
gtccaaaacgacgtggacttgctcacgttgtacttagtcatcgccttggcatctgtgtct
tctctcttcctcttgtctgtgctgctgtttgtgggggtgagactgtgcaggagggccaga
gcagcttgctgctctgtgcctgagggacactttcctggccacctggtggacgtcagcggt
atggggaccctgtcacagagctaccagtatgaggtgtgtctgacaggagatgctgggact
ggtgagttcaaattcctgaatccggtgataccaaacctgtttctggaagaatctgaaaga
agttaa
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