Mus caroli (Ryukyu mouse): 110284914
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Entry
110284914 CDS
T05910
Name
(RefSeq) protocadherin beta-8
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284914
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
110284914
NCBI-ProteinID:
XP_021006570
Ensembl:
MGP_CAROLIEiJ_G0022164
UniProt:
A0A6P5NZ83
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Position
18:34601204..34603771
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AA seq
779 aa
AA seq
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METALTKTSEKRQVIFLAILLLLWEAGSEAISYSMPEETESGYLVANLAQDLGLRVGELA
TRGARIHHNGNKELLQLDAERGNLLLKEKPDREALCGATEPCVLHFQIILENPVQFFQTD
LQLTDINDHSPEFPDTEMVLKIQEIAQPGTVFPLKAAQDPDIGSNAVQNYTVSPNLHFHV
VTLSHSDGRKYPELVLDRALDREEQPELALILTALDGGAPPKSGTTTVRIEVVDINDNAP
QFVQSLYAVDVPENSPLDALVVTVSARDLDAGIHGKVAYSLFQGRGGSQPFVIDEITGEI
RLKGALDFETTSYYNMEIVATDSGGLSGKCTVAIQVLDVNDNAPKLTISSLTSSIPENAP
EAVVAVFSVSDPDSGDNGRMVCSIQNELPFLLKPTFKNFYTLVTERPLDRESRAEYNITI
TVSDLGTPRLTTQHTITVQMSDINDNAPAFTQTSYTLFVHENNSPALHIGTISATDSDSG
SNGLIIYSLLPPHDQQLGLASLISINSDNGQLFALRALDYEALQAFEFRVGATDGGSPAL
SSQALVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLLLVKDNGDPPRSASVMLQVL
VVDGFSQPYLPLPEVALNPTQEEDMLTLYLVIALASVSSLFLLSVLLFVGVRLCKKAREA
SLGDCSIPEGHFPSHLVDVSGAGTLSQSYHYEVCLTEDSGTSDFKFMNPIIPTSLLQDS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctaacaaaaacgtcagagaaaaggcaagtcattttccttgctatattg
ttgcttttgtgggaggctggttctgaggcaattagctattccatgccagaagaaacggag
agtggctacttggtggctaacctggcacaagatctggggctcagggttggggaactggcc
actagaggggcacgaatccatcacaatggtaacaaagagctcttgcagcttgatgcagag
agaggaaatttgctcctgaaggaaaaaccagatcgcgaagcactgtgtggggcgacagaa
ccctgtgtgctgcacttccagatcatactagaaaaccctgtgcagttctttcaaacagac
ttgcagctcacagatataaacgaccattctccagagttccctgacacagaaatggtgcta
aaaattcaagaaattgcccagccaggaactgtgtttcctctgaaggcagctcaggaccct
gacatagggagcaacgctgttcagaactacacagtcagtcccaacctccatttccatgtg
gttactctcagtcactcagatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcaacctgagctcgctttaatcctcaccgctctggatgggggagctccg
cccaagtctgggacaacaactgttcgaattgaagttgtggacatcaatgataatgccccc
cagtttgtacagtcactctatgcggtggatgtccctgagaacagccccctcgatgcctta
gttgtcacagtctctgccagggatttagatgctgggatacatggcaaggtagcctactct
ctgtttcaaggcaggggaggttctcaaccatttgtgatagatgaaatcacaggagaaatt
cgtcttaaaggggcactggattttgaaacaacttcatattataacatggaaattgtagcc
acagacagtggcggtctttcaggaaaatgcactgtagctatccaggtgttggatgtgaac
gacaatgcccctaagctcaccatctcttcgctcactagttccattccagaaaatgctcct
gaggccgtagttgctgttttcagtgtctctgacccggattctggggataatgggaggatg
gtgtgttctattcagaacgaacttccatttcttttaaaacccacattcaagaacttttac
accctagtgacagagagacccctggatagagaaagcagagctgagtacaacatcacaatc
acggtctccgacctgggcacacccaggctcacaacccagcacactataacagtgcaaatg
tccgatatcaatgataatgctcctgccttcactcaaacttcttacaccttgtttgttcat
gagaacaacagccccgccctgcacataggcaccatcagcgccacagactcagactctggc
tccaatggccttatcatctactcgctgctgccgccccatgaccagcagctgggccttgcc
tcgctgatctctatcaactcagacaacgggcagctgtttgcgctcagggcgctggactat
gaggcactgcaggcctttgagttccgcgtgggcgccacagacggaggttcgcccgcgctc
agtagccaggctttggtgcgcgtggtggtactggacgacaatgacaatgcgcccttcgtg
ctctacccgatgcagaatgcctctgcgccttgcactgagctgctgcccagggcagcggag
cctggatacctggtcaccaaggtggtggctgtggaccgcgactctggccagaatgcctgg
ctgtcgttccaactgctcaaggccacggagcccgggttgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagcgagcgtgatgcgcccaagcacaggctgctg
ctgctggtcaaggacaatggagatcctccgcgctctgctagtgtcatgctgcaagtgcta
gtagtggatggcttctctcagccctacctgcctctgccagaggtggcgctcaaccccaca
caggaagaagacatgctcactctctatctggttattgccttggcttctgtgtcttcgctt
ttcctcttgtctgtgctgctgtttgtgggggtgaggttgtgcaagaaggccagggaggct
tctctgggtgactgctctattcctgagggacactttcctagccatctggtggatgtcagt
ggtgcggggaccctatcccagagttatcattatgaggtctgtctgactgaggactctggg
acctcagatttcaagttcatgaaccccattattcctactagtctccttcaggactcctaa
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