Mus caroli (Ryukyu mouse): 110284915
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Entry
110284915 CDS
T05910
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284915
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
110284915
NCBI-ProteinID:
XP_021006571
Ensembl:
MGP_CAROLIEiJ_G0022177
UniProt:
A0A6P5NZG4
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All DBs
Position
18:34736350..34741021
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AA seq
774 aa
AA seq
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MEPGVGAAQHIRQVLLFFVFLEGSSVLATTWRYSVPEEMETGSSIANIIKDMDVGDLAAR
GARVIFDDYQPYLRLELETGNLLLNKKLDREALCSSSEPCILHFQVLLENPLQFLQAELL
IEDINDHTPTFLEKLIFLNISESATPGTSFQMNDAQDLDIGMNGIQNYSISPNPYFYLKL
KDSGKGRRYPELVLVRSLDREKEASISLILTAMDGGSLPRSGTVLVQVVVLDVNDNAPEF
ERTLYEVQVPENSSVDSLVIKVSATDLDSGINGEISYSFSHISRDVQKTFEIHPTSGEVH
LKTLLDFEVIQSYTINIQAIDGGGLSGKSAIIVQVTDVNDNPPEIVITSLMSSIPENGLS
EMVVAVFSLRDQDSGENGRVMCSIEDKLPFLLKPTFKNFYTLVTEHPLDRESRAEYNITI
MISDLGTPRLTTQHTITVHISDINDNAPAFSQTTYTMFVHENNSPALHIGTISATDSDLG
SNAHITYSLLPPQDQRLALTSLISINADNGQLFALRALDYETLQAFEFLVSATDRGSPAL
SSQALVRVVVLDYNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVLKHRLLLLVKDNGDPPRSASVTLHLL
VVDGFSQPYLPLPEVAHDSTHVDEEALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLGGYSETDGHFPGHLVDVSGAGTLSQSYQYEVCLTGMSDSNDIRFLKPVSQP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggagttggagctgctcagcatataaggcaagtgctgcttttctttgttttc
ctggaagggtcctcggttcttgccacgacctggagatattctgtgccagaagaaatggag
actggctcctctatagccaatataattaaagatatggatgtgggtgatctggctgcacga
ggggccagagttatatttgatgactaccagccttatttgcggttagaactggagactggc
aacttgcttttgaataaaaaactggacagggaggcactttgttctagcagcgaaccctgt
atattgcatttccaggtgttattggaaaatcctctgcaatttcttcaggctgagcttttg
attgaagacataaatgaccatacccccacatttctagaaaaactcatatttctaaatatc
tcagaaagtgctactccgggaacctcattccaaatgaatgatgctcaggacttggatata
gggatgaatggtatccaaaactattcaataagccccaacccctatttctaccttaagtta
aaagacagtggtaaaggaagaagatatccagagctggtactggttagatctctggacaga
gaaaaggaggcttcaattagcttaatactcacagctatggatggtgggtccctgcccagg
tcagggactgtattggttcaagttgtggttctggatgtcaatgacaatgcccctgagttt
gaaaggaccctgtacgaggtccaagtaccagagaacagttctgtggactcactggtaatc
aaggtgtctgctacagatttggattcgggaataaatggagaaatatcttattcgttttct
catatctctagagatgtacaaaaaacattcgaaatccatccaacctccggtgaagtccat
ttgaaaacactcctagattttgaggtaattcagtcttatacaataaatattcaagccatc
gatggtggtggtctctctggaaaatcagccattattgttcaggttacagatgtgaatgac
aacccaccagaaatagtcattacatctcttatgagctctatcccagagaacggtttgtca
gagatggtggtcgctgttttcagtttacgagaccaagactctggagaaaatgggagagtg
atgtgttcaattgaagacaaactcccttttctcttgaaacctactttcaaaaatttctac
actctagtaacagagcatccactggacagagagagcagagctgagtacaacatcaccatc
atgatctccgacctgggcacacccaggctcacaacccagcacaccataacagtgcacatc
tctgacatcaacgacaacgcccccgccttctcccaaaccacctacaccatgttcgtccac
gagaacaacagcccagccctgcacataggcaccatcagtgccacagactcagatttaggc
tccaatgcccacatcacctactcactgctgccaccccaagaccagaggctggccctcacc
tcgctaatctccatcaacgctgacaacgggcagttgtttgcgctcagggctctggactat
gaaaccctacaggccttcgagttcctcgtgagtgccacggaccgaggctcacccgcgctc
agcagccaggcgctggtgcgcgtggtggtgctggactacaatgacaatgcgcccttcgtg
ctctacccaatgcagaacgcttctgcgccctgcacagagctgctgcccagggcggcagag
cctggctacctggtcaccaaggtggtggctgtggatcgcgactctggacagaatgcctgg
ctgtcgttccagctactcaaggccacggaacctgggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagcgagcgcgatgtgctcaagcacaggctgctg
ctgctagtcaaggacaatggcgatcctccgcgctctgccagcgtcacgctgcacctgttg
gtggtggatggcttctctcagccctacctgcctctgccagaagtggcgcacgactctacc
cacgtggatgaagaagcgctcacactctatttggtcattgccttggcgtctgtgtcttcg
ctctttctcttgtccgtgctactgttcgtgggggtgaggctgtgcaggagggccagggcg
gcctctctgggtggctactctgagactgatggacactttcctggccacctggtggatgtc
agcggcgcggggaccctgtcccagagctaccaatatgaggtgtgtctgacaggaatgtca
gattccaatgatattcggttcctaaagcctgtctcccaaccttga
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