Mus caroli (Ryukyu mouse): 110284916
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Entry
110284916 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-6
KO
K16494
protocadherin beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110284916
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Protocadherins
110284916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110284916
NCBI-ProteinID:
XP_021006572
Ensembl:
MGP_CAROLIEiJ_G0022162
UniProt:
A0A6P5NTY3
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Position
18:34580030..34583120
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AA seq
780 aa
AA seq
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METTLAKTSEKRQVVFLAILFLLWEAGSEAIRYSMPEEMESGYLVAHFAKDLGFRVGELA
TRRARIHHRGNKELLQLDVETGNLLLKEKPDREALCGATEPCVLHFQIILENPVQFFQTD
LQLTDINDHSPEFPDTEMLLKIQEIAQPGTVFPLKAAQDPDIGSNAVQNYTVSPNLHFHV
ITLSRSDGRKYPELVLDRALDREEQPELSLILTALDGGAPPRSGTTTVRIEVVDINDNAP
KFVQSLYAVEVPENSPLDAFVVAVSARDLDAGIHGKVAYSLFQGGGGSQPFVIDEITGEI
RLKGALDFETTSYYNMEIIATDSGGLSGKCTVAIQVLDVNDNAPKLTISSLTSSIPENAP
EAVVAVFSVSDPDSGDNGRMVCSIQNELPFLLKPTFENYYTLAAEGPLDRENREEYNITI
IVSDLGTPRLTTQHTITVQVSDINDNAPAFTQASYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPHDLQLALASLVSINADNGQLFALRAMDYEALQAFEFHVGATDGGSPAL
SSQALVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVTKVVAVDSDSGQNAW
LSFQLLKATEPGLFSLWAHNGELRTTRLLSEREAPKHRLLLLVKDNGEPQRSASVTLHVL
LVDGFSQPYLPLPEVQHDSSQDEDLLTLYLVVALASVSSLFLLSVLLFVGVRLCRRVREA
SLDACSVPEGHFPSHLVDVSGMGTLSQSYQYEVCLSGDSGITDFKFLNXIIHNRVLQESN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagacaacgctagcaaaaacgtcagagaaaaggcaagtggtttttcttgctatattg
tttctattgtgggaggctggttctgaggcaattagatattccatgccagaagaaatggag
agtggttacttggtggctcacttcgcaaaagatctgggcttcagggtaggggaactggcc
actagaagggctcgaatccatcacagaggaaacaaagagctcttgcagctagatgtggag
acagggaatttgctcctgaaggaaaaaccagatcgcgaagcactgtgtggggcgacagaa
ccctgtgtgctgcacttccagatcatactagaaaaccctgtgcagttctttcaaacagac
ttgcagctcacagatataaacgaccattctccagagttccctgacacagaaatgctgcta
aaaattcaagaaattgcccagccaggaactgtgtttcctctgaaggcagctcaggaccct
gacatagggagcaatgctgttcagaactacacagtcagtcccaacctccatttccatgtc
attactctcagtcgctcagatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgagctctctttaatccttaccgctctggatgggggagccccg
cccaggtcaggaaccaccacagttcgaattgaagttgtggacatcaatgataacgccccc
aagttcgtacagtcactctatgcggtggaggtccctgagaacagccccctcgatgccttc
gttgtcgcggtctctgccagggatttagatgctgggatacatggcaaggtagcctattct
ctgtttcaaggcgggggagggtctcaaccatttgtgatagatgaaatcacaggagaaatt
cgtcttaaaggggcactggattttgaaacaacttcatattataacatggaaattatagcc
acagacagtggcggtctttcaggaaaatgcactgtagctatccaggtgttggatgtgaac
gacaatgcccctaagctcaccatctcttcgctcactagttccatcccagaaaatgctcct
gaggctgtagttgctgttttcagtgtctctgacccagattctggggataatgggaggatg
gtgtgttctattcagaatgaacttccatttcttttgaagcctacattcgaaaattactac
actttagcggcagaagggccactggacagagagaacagagaagagtacaacatcaccatc
atagtctccgatctgggcacgcccaggctcacaacccagcacactataacagtgcaggtg
tctgacatcaacgataatgcccctgccttcacccaagcctcctacaccatgttcgtccac
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgccaccccatgacctgcaactggcccttgcc
tcgctggtttccatcaatgcagacaatgggcagctgttcgctctcagggcaatggactat
gaggccctacaggcctttgaattccatgtgggcgccacagatggaggctcacctgcgctc
agcagccaggctctggtgcgtgtggtggtgctggatgacaatgacaatgcgcccttcgtt
ctctacccgatgcagaatgcttctgcgccctgcactgagctgctgcccagggctgcggag
cctggctacctggtaaccaaagtggtggcagtggactctgactctggccagaatgcttgg
ctgtcattccagttgctcaaggccacggaacctgggttgttcagcctctgggctcacaat
ggcgagttgcgcaccaccaggctgctgagtgaacgagaagcacccaagcacagactgctg
ttgctggtcaaggacaatggagaacctcagcgctctgccagtgtcactcttcatgtgctg
ctagtggatggcttctctcagccctacctacctctgcctgaggtgcagcacgactcttca
caggatgaagacttgctcacactgtacctggttgttgccttggcctctgtgtcttctctc
ttcctcctgtctgtactgctgttcgtgggggtgaggctttgcaggagggtcagggaggcc
tctctggatgcctgctctgtgcctgagggacactttcctagccacttagtggacgtcagc
ggtatggggaccctgtcccagagctaccagtatgaggtgtgtctgagcggagactctggg
attacagatttcaaattcctgaacnncattattcacaatagagtccttcaggaatccaac
taa
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