Mus caroli (Ryukyu mouse): 110285280
Help
Entry
110285280 CDS
T05910
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05017
Spinocerebellar ataxia
mcal05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110285280 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110285280 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110285280 (Vldlr)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110285280 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
110285280
NCBI-ProteinID:
XP_021006979
Ensembl:
MGP_CAROLIEiJ_G0022843
UniProt:
A0A6P5NXU3
LinkDB
All DBs
Position
19:24272695..24309725
Genome browser
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRDSGATASGKKGKCDSSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
TSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLLIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDINTTDILRTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagcggcgccactgcaagcgggaagaaaggcaaatgtgatagctcccagtttcagtgc
acaaatggccgctgcattaccctgctgtggaaatgtgatggagatgaagactgtgcggat
ggcagcgatgagaagaactgcgtaaagaagacgtgtgctgagtctgacttcgtgtgcaaa
aatggccagtgtgttcctaacagatggcagtgtgacggggatcctgattgcgaagatggt
tctgatgaaagccccgaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatccccgtgtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacataacgtgtagtgcagatgagttcact
tgctccagtggccgctgcgtctccagaaactttgtgtgcaatggccaggatgactgtgac
gatggcagtgatgagctggactgtgctccaccaacttgcggagcccatgagttccagtgc
agcacctcttcctgcattcccctcagctgggtgtgtgatgatgatgcagactgttcggac
caatcagatgagtctcttgagcagtgtggccgtcagcctgtgatacataccaaatgtcct
accagtgagatccagtgtggctctggcgagtgcattcacaaaaaatggaggtgtgatgga
gaccctgactgcaaggacggcagcgatgaggtcaactgcccttctcgaacctgcagacct
gaccagtttgaatgtgaagatggtagctgtatccatggcagcaggcaatgcaatggcatc
cgagactgtgttgatggctctgatgaagtcaactgcaaaaacgtcaatcagtgcctgggc
cctggaaaattcaagtgcagaagtggggaatgcatagacatgagcaaagtatgtgaccag
gaacaagactgcagagactggagtgatgagcccctgaaggaatgccatatcaacgaatgc
ttggtcaataacggtggctgttcccatatctgcaaagacctacttataggctatgagtgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgatgaatgc
caaaacccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatcgaagagacatcaggaagattggcctagagcgaaaggaa
tacatccaacttgtagaacaactaaggaacacggtggctctcgatgcggacatcgcagct
cagaagctgttttgggctgatctaagccagaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagacggagccaagaggaagttcctgtttaattctgacttgcgagagcctgcctcc
atagctgtggatccgttgtcaggctttgtttactggtcagactggggcgagccagctaaa
atagaaaaagcaggaatgaatggatttgatagacgtcctctggtgacggaggacatccaa
tggcctaatggaattacactcgaccttgtcaaaagccgtctctactggctggattccaag
ttgcacatgctctctagtgtggacctaaatggtcaagatcgtaggatagtgctcaagtct
ctggagttcctagctcatcctcttgcactcaccatatttgaggatcgcgtctactggata
gatggagaaaatgaagcagtgtatggtgccaataaattcactgggtcagagctggccact
ctagtgaacaatctcaatgatgcccaagacatcattgtctaccatgaactcgtccagccg
tcaggtaaaaattggtgtgaagatgatatggagaatggaggatgtgaatatctctgcctg
ccagcaccacagatcaatgaccactctccaaaatatacctgttcctgtcccaatgggtac
aatctcgaagaaaatggacgagagtgtcaaagtacttcaactcctgtgacttacagtgag
acaaaagatatcaacacaacagacattctacgaactagtggactggttcctggagggatc
aatgtgaccacagcagtatcagaagtcagtgttcccccaaaagggacttcagctgcctgg
gccatccttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggagg
aattggcaacataaaaacatgaaaagcatgaactttgacaatcctgtgtacttgaagacc
actgaagaggacctgtcgatagacattggtagacacagcgcttctgtaggacacacatac
ccagcaatatcagttgtaagcacagatgatgatctggcttga
DBGET
integrated database retrieval system
