KEGG   Mus caroli (Ryukyu mouse): 110285309
Entry
110285309         CDS       T05910                                 
Symbol
Capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04141  Protein processing in endoplasmic reticulum
mcal04210  Apoptosis
mcal04217  Necroptosis
mcal04218  Cellular senescence
mcal04382  Cornified envelope formation
mcal05010  Alzheimer disease
mcal05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110285309 (Capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110285309 (Capn1)
   04217 Necroptosis
    110285309 (Capn1)
   04218 Cellular senescence
    110285309 (Capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110285309 (Capn1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110285309 (Capn1)
   05022 Pathways of neurodegeneration - multiple diseases
    110285309 (Capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mcal01002]
    110285309 (Capn1)
Enzymes [BR:mcal01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     110285309 (Capn1)
Peptidases and inhibitors [BR:mcal01002]
 Cysteine peptidases
  Family C2: calpain family
   110285309 (Capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 110285309
NCBI-ProteinID: XP_021007035
Ensembl: MGP_CAROLIEiJ_G0022582
UniProt: A0A6P5P3P6
LinkDB
Position
19:complement(2771091..2797469)
AA seq 713 aa
MAEELITPVYCTGVSAQVQKKRDKELGLGRHENAIKYLGQDYETLRARCLQSGVLFQDEA
FPPVSHSLGFKELGPHSSKTYGIKWKRPTELMSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETILHRVVPYGQSFQDGYAGIFHFQLWQFGEWVDVVIDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPGDLYQIILK
ALERGSLLGCSINITDIRDLEAVTFKNLVRGHAYSVTGAKQVTYQGQRVNLIRMRNPWGE
VEWKGPWSDSSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKS
RTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDNRESGCSFL
LALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLR
EVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEE
EIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG
NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIIT
RYSEPDLAVDFDNFVCCLVRLETMFRFFKLLDTDLDGVVTFDLFKWLQLTMFA
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcagaggagttaatcacacctgtgtactgcaccggggtgtcagcccaagtgcagaag
aagcgggacaaggagctgggcttgggccgccatgaaaacgccatcaagtacctgggccag
gattacgaaacgcttcgggctagatgcctgcagagcggggtccttttccaagacgaggcc
ttccctccggtttctcatagcctgggcttcaaggaactgggtccccattcctctaaaacc
tatggcatcaaatggaagcggcctacggaactgatgtcaaacccccagttcattgtggat
ggagccacccggacagacatctgccagggagcactgggggactgttggctcctggctgcc
attgcctccctcaccctcaacgagactattctgcaccgagtggttccctatggccagagc
tttcaggacggctacgccggcatctttcatttccagctgtggcagtttggggagtgggtc
gacgtagtcatagatgacttgctgcccaccaaggacgggaagctggtgtttgtgcactct
gcccagggcaacgagttctggagcgcactgctggagaaagcctatgctaaagtgaatggc
agctatgaggccctttcgggaggctgcacctcagaggccttcgaggactttaccggtggg
gtcactgagtggtacgatctgcagaaggcccccggcgacctctaccagatcatcctaaag
gccctggaacgaggctccttgctgggctgctccattaatatcaccgatatccgtgattta
gaggctgtcacttttaagaacctggtgaggggccacgcgtactctgtgacgggcgccaag
caggtaacttaccagggccagcgggtgaacctaatccggatgcggaacccgtggggtgaa
gtggagtggaaaggaccctggagtgacagctcctatgagtggaacaaagtggacccctat
gaacgagagcagctgagggtcaagatggaggatggggagttctggatgtcgttccgagac
ttcatccgtgagttcaccaaactggaaatctgcaaccttacaccggacgcccttaagagc
aggaccctccggaattggaataccacattttacgagggcacctggcgtcggggaagcact
gctggaggctgcaggaactacccagccaccttctgggtcaacccccagttcaagatccgg
ttggaggaggtggatgatgccgatgactatgacaaccgagagtcgggctgcagcttcttg
ttggccctcatgcagaagcaccgccgcagggagcgtcgctttggccgggacatggagacc
attggtttcgcagtgtaccaggtccctcgggagctggcgggtcagcctgtgcacttgaag
cgtgacttcttcctggccaacgcttctcgggcgcagtcggagcatttcatcaaccttcgg
gaagtcagtaaccgtatccgcctgccgcccggggagtatatagtggtgccctccaccttc
gagcccaacaaagagggcgacttcctgctgcgcttcttctcagagaagaaggctgggacc
caggaactagatgaccagatccaggccaacctccccgatgagaaagttctctcggaagag
gagattgatgacaacttcaagaccttgttcagcaagttggcaggggatgacatggagatc
agcgtcaaggagctacagaccatcttgaacaggatcattagcaaacacaaagacctgcgc
actaatggcttcagcctggagtcgtgccgcagcatggtgaacctcatggatcgagatggc
aacgggaagctgggtctggtggagttcaacatcctgtggaaccgcatccgaaattacctg
accatcttccggaagtttgacctggacaagtctggcagcatgagtgcctacgagatgagg
atggccatcgaggctgcaggcttcaagcttaacaagaagttgcatgaactcattatcacc
cgctactcggagcctgacctggccgtggactttgacaactttgtgtgctgccttgtgcgg
ctggagaccatgttccggtttttcaaacttctggacacagacctggatggtgttgtgacc
tttgatctatttaagtggctccagctgactatgtttgcctga

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