Mus caroli (Ryukyu mouse): 110285345
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Entry
110285345 CDS
T05910
Symbol
Btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110285345 (Btaf1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110285345 (Btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
ARM_ECM29
UTP20
Rac1
Motif
Other DBs
NCBI-GeneID:
110285345
NCBI-ProteinID:
XP_021007074
Ensembl:
MGP_CAROLIEiJ_G0022909
UniProt:
A0A6P5NY05
LinkDB
All DBs
Position
19:33486512..33573669
Genome browser
AA seq
1848 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGS
AGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSA
ALVNKQSTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGE
PEEKRRKVANVVINQAASDSKVLIDNVPESSSLIEETNEWPLESFCEELCNDLFNPSWEV
RHGAGTGLREILKAHGKSGGKMGDSTLEEMVQQHQEWLEDLVIRLLCVFALDRFGDFVSD
EVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPSIINTLWDSLL
ELDDLTASTNSIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETL
FTLLSTQDENSSSWLIPILSDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVA
AACPWMSAWLCLMMQPSHLPIDLNMLLEVKARAKEKTGGKVRQGQIQNKEVLQEYIAGAD
TIMEDPATRDFVVMRARMMAAKLLGALCCCICDPSVNMVNQEMKPADSLGQLLLFYLNSK
SALQRISVALVVCEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQF
ISSLADAHIEVGNRVNNNVLTIDQANDLVTTVFNEVTSTFDLNPQVLQQLDSKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQYI
AKLLQQCTTRTPCPNSKVIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSNSEKDGMH
HTVTKHRGIITLYRHQKAAFAITSRRGPIPKAIKAQIADLPAGSSGTVLVELDEAQKPYL
VQRRGAEFALTTIVKHFGAEMAVKLPHLWDAMVGPLKSMIDLNNFDGKSLLERGDVPAQE
LVNSLQVFEIAAASMDSALHPLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIATMET
MNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDS
VRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYARSKL
AECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVA
SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL
ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL
RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAVLSEETEKPK
LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQ
LLLDCGLGNGSSTESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD
KDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNLETFMRSLE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgatcgtctttttatcttactggatactggtactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatcctcatgaatta
aataatttgttatctaaggtattaatatatttaaggagtacaaattgggatacccggatt
gcagcaggacaagctgttgaagctatagtgaaaaacgtgcctgagtggaatccagtgcca
agaaccaaacaagaacccacagagagttctatggaagattcatctactacagatcgatta
aattttgacagatttgatatatgcagattgttacagcatggggcatcacttttggggtct
gctggtgcagaatttgaagtccaagatgaaaaatcaggtgaagtggatcctaaagagagg
atagcacgccaacggaaattattacagaagaaacttggacttaatatgggagaagcaatt
ggaatgagtactgaagagctcttcaacgatgaggatttggattacaccccgacttcagca
gccctcgtaaacaaacaatctactctccaagcagctgaattgattgattcagaattccga
gcaggaatgagtaataggcagaagaacaaagctaaaagaatggccaagttatttgcaaaa
cagagatccagggatgcagtggaaacgaatgagaagagcaatgacagcactgatggagag
ccagaagaaaagagacggaaagtagcaaatgttgttattaatcaggctgcaagtgattcc
aaagtcttgatagataatgttccagaaagttcttccttaattgaagagacaaatgaatgg
cctttggaaagcttttgtgaagaactttgcaatgacctttttaatccctcctgggaggtt
cgacatggggcaggtactggactcagagaaattcttaaagctcatgggaaaagtggtggt
aaaatgggagacagcactttagaagagatggttcagcagcatcaggagtggttggaagac
ttagtcattagactcctttgtgttttcgcattggacagatttggagacttcgtttctgat
gaagttgtagcgccagttcgtgaaacttgtgctcaaacgttaggtgtggttttaaagcac
atgaacgaaacaggagttcataagacagtggatgtgctgctgaaattattgacacaagaa
cagtgggaagttagacatggtggtcttctgggaataaaatatgctttggcagttcgtcag
gatgtaattaatactttattgcctaaagtcttaactcgaataatcgaaggactccaggac
cttgatgacgatgttagagctgttgctgcagcgtccttggttcctgtagtagaaagcctt
gtctaccttcagacacaaaaggtaccctccattataaataccttatgggattctcttctg
gaattagatgatctaacagcttcaacaaatagtattatgactctcctttcatccatgtta
acataccctcaggtccagcaatgcagtattcagcagtcactcacagttttagtcccacgt
gtctggccatttttgcatcacactatatcttcagttcgaagagcagcattggaaactctc
tttacattattatcaacacaggacgagaactcttcatcttggcttatacctatcctgtcg
gatatgctgagacacatctttcagttttgtgttttagaaagcagccaggaaattctggat
cttattcacaaggtctggatggagctgttgagcaaggcatcagttcagtatgtggtagca
gctgcatgcccatggatgagtgcttggctttgcctaatgatgcagccttctcacttacct
attgatttaaatatgctgctggaagtaaaagctagagccaaggaaaaaacaggtggtaag
gtacggcaaggtcaaatccagaataaagaagtgcttcaggagtatattgctggtgcagac
accatcatggaagacccagcgaccagagattttgtagttatgagggccaggatgatggca
gctaagctgttaggagcactctgttgctgtatttgtgatccaagtgtcaatatggtaaac
caagaaatgaaaccagcggattcccttggccagttactgctcttctatttgaattccaaa
tctgctttacagagaattagtgttgcattagtagtctgtgagtgggctgctttacaaaag
gagtgtaaagctgttaccctagctgtgcaaccgcgtttacttgatatcctttcagaacat
ttgtattatgatgaaattgctgttccgttcacacgtatgcagaatgaatgtaaacagttt
atatcatcattagctgatgcacatattgaagttggtaatagagtaaacaacaatgtttta
acaatagatcaagctaacgacctggtaaccactgtttttaatgaagtcacatcaactttt
gatttaaatcctcaagtgttacagcagttagatagtaaacggcatcaggtccaaatgaca
gttgctgagacgaaccaggagtggcaagtactgcagctgagagtacatacgtttgctgcg
tgtgctgttgtgagcttgcagcagcttccggagaaactaaatcctatcataaaaccatta
atggaaacgattaaaaaagaagagaatacgctagtgcagaactatgctgctcagtacata
gctaagcttcttcagcagtgtacaacaaggacaccatgccctaattcaaaagttattaag
aacctctgtagctctctttgtgtggacccatacctcactccctgtgttacatgtccagta
ccaacacaaagtggccaggaaaattccaaaggatccaactcagaaaaggatggaatgcac
cacactgtcaccaagcacagggggatcattacactctacaggcatcagaaagcagcattt
gccatcaccagcaggcgaggtcccatccccaaagcaatcaaagctcagatagcagatcta
cctgcaggaagtagtgggactgtcctggtggaacttgatgaggctcagaagccttacctg
gtacaacggagaggagctgaatttgccttaacaactatagtgaagcattttggtgctgaa
atggcagtgaagttgccacatctttgggatgctatggttggcccattgaagtctatgatt
gacctaaataattttgatggaaagtctctcctggaaagaggtgatgttcctgctcaagaa
ttggtgaattccctgcaagtgtttgaaatagcagcagcttccatggactctgcacttcat
cccttgctggtacagcacttgcctcatctttatatgtgccttcagtaccccagcactgca
gtgaggcacatggcggctcgttgcataggtgtcatgagtaaaatagctaccatggaaaca
atgaatatttttttggagaaggtacttccttggttgggagcaattgatgacaatgtcaag
caagaaggtgcaattgaagcacttgcctgtgttatggagcaattggatgtcggtattgtt
ccatatattgtccttttagttgttcctgtattgggaaggatgagtgatcagacagacagt
gtgagattcatggctacgcagtgctttgcaacactgattagactgatgccacttgaggca
ggcattccagaccctccaaacatgtcagaagaattaatccagttgaaagcaaaagagcga
cactttttagagcaattgttagatgggaagaagttagaaaattacaagatcccagtacca
atcaatgctgaactcaggaaatatcagcaggatggtgtgaactggttggcctttctcaat
aagtataagcttcatggaattctgtgtgatgacatgggcttaggaaaaacattacagtcc
atctgcatcctagcaggagatcattgtcagagggcccaggaatatgcaagatcgaaattg
gcagaatgtatgccacttccttccttggtggtttgtccaccaacattaacaggtcattgg
gtagatgaagtaggtaaattttgttccagagaatatctcaatccgttgcattatactggc
cctcccactgaaaggataaggttgcaacatcaagtaaaaaggcacaatctgatagtagcc
tcatatgatgttgtgaggaatgacatagacttttttagaaatattaaatttaactactgt
attcttgatgaaggccacgtcataaaaaatggaaaaaccaagttgtccaaagcagtaaag
cagctgactgctaattataggattattctttctggaacaccaatccagaacaatgttttg
gagttgtggtcattatttgatttccttatgcctggatttttgggtactgaacgccagttt
gctgctcgatatggcaaacctatattagcgagtagggatgcacgaagctccagtcgagaa
caagaagcaggtgtcctggcaatggatgctctgcaccgccaagtcctgccgttccttctc
agaagaatgaaagaagatgttttgcaggatcttccacctaaaattattcaagactattac
tgtactctcagccctctccaggttcagctttatgaagattttgctaagtcgcgtgccaag
tgtgatgttgatgagaccgtgtcttcagctgtgctttcagaagaaactgaaaaaccaaaa
cttaaagctacaggtcatgtattccaggcattacaatatttacgtaagctctgcaaccat
ccagcactggtcttaacccctcagcatccagaattcaagagcactactgaaaaactggcc
gttcagaattcttctcttcatgatattcaacatgcgcctaagctctcagccttgaaacaa
ttgctgttggactgtggtttgggaaatggcagttctacagagagtgggacagaatctgtt
gtggcccagcacagaatactgatcttctgtcagcttaaaagcatgcttgatatagtagaa
catgatctgctcaaacctcacctgccctctgtcacttacttgagactagatggcagcatt
cctcctggacagcggcattccattgtttcccggtttaacaacgacccctccatcgatgtt
cttcttctcacaactcatgttggtggcctgggcctgaacttgaccggagctgacactgtg
gtgtttgtggagcatgactggaaccctatgcgagatctgcaggccatggaccgggcccat
cgtattgggcagaaacgtgtggttaatgtctaccggctgataaccagaggaacactggaa
gaaaagataatgggcttgcagaagttcaagatgaacattgcaaatactgttattagccaa
gaaaactctagcttacagagtatgggcacggatcaacttcttgacctgttcactctagat
aaggatggaaaagcagaaaaggctgacagctccacttctgggaaagcaagcatgaaatca
gttcttgagaacctgagtgacctctgggacgccgagcagtatgattcggagtacaacctg
gagaccttcatgcgctctctcgagtga
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integrated database retrieval system
