Mus caroli (Ryukyu mouse): 110285422
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Entry
110285422 CDS
T05910
Symbol
Btrc
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X8
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04114
Oocyte meiosis
mcal04120
Ubiquitin mediated proteolysis
mcal04218
Cellular senescence
mcal04310
Wnt signaling pathway
mcal04340
Hedgehog signaling pathway
mcal04390
Hippo signaling pathway
mcal04710
Circadian rhythm
mcal05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110285422 (Btrc)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110285422 (Btrc)
04340 Hedgehog signaling pathway
110285422 (Btrc)
04390 Hippo signaling pathway
110285422 (Btrc)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
110285422 (Btrc)
04218 Cellular senescence
110285422 (Btrc)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110285422 (Btrc)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110285422 (Btrc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110285422 (Btrc)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110285422 (Btrc)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110285422 (Btrc)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110285422 (Btrc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_VPS8
F-box_5
WD40_2
DUF4508
DUF6188
Motif
Other DBs
NCBI-GeneID:
110285422
NCBI-ProteinID:
XP_021007233
Ensembl:
MGP_CAROLIEiJ_G0023015
UniProt:
A0A6P5P0Z3
LinkDB
All DBs
Position
19:42017196..42183622
Genome browser
AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCINQETVCLTSTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAESILSYLDARSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDENAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAHAEPPRSPSRTY
TYISR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacccggcagaggcggtgctgcaggagaaagcgcttaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttac
aacagctgtgccaggctttgcataaaccaagagacagtatgtctaacaagcactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagcatgattgtg
cccaagcagcggaaactctcagcaagctatgagaaggaaaaggagctgtgtgtcaagtat
tttgagcagtggtcagagtctgatcaagtggaatttgtagaacaccttatatcccaaatg
tgtcactaccagcatgggcacatcaactcctacctaaaacctatgctgcagagggatttc
ataactgcactgccagcccggggtctggaccacatcgctgagagcattctgtcgtacttg
gacgccaggtcactgtgtgctgctgagctcgtgtgcaaggaatggtaccgcgtgacgtcg
gacggcatgctgtggaaaaaactcatcgagaggatggtcaggacggactctctgtggcga
ggcctggcagagcgcagaggctggggacagtacttattcaaaaacaaacctcctgatgag
aatgctcctcccaactccttttatagagcgctttatcctaaaatcatacaagacattgag
acaatagagtccaattggcgatgtgggcgacatagtttacagagaatccactgccggagt
gaaacaagtaaaggggtttactgtttacagtacgacgaccagaagatagtcagcggcctt
cgagacaacaccatcaagatctgggataaaagcacactggaatgcaagcggattctcaca
ggccacacgggctctgtcctgtgtctgcagtacgatgagagggtaatcatcacgggttcc
tcagactccaccgtcagagtgtgggatgtaaatgcaggtgagatgctaaacacattgatt
caccactgtgaagccgttctgcacctgcgcttcaataatggcatgatggtgacctgctcc
aaagaccgttccatcgctgtgtgggatatggcttccccaactgacatcaccctcaggagg
gtgctggtgggacaccgagctgcggtcaatgttgtagactttgatgacaagtacatcgtt
tctgcctctggagatagaaccataaaggtgtggaacacaagtacctgtgaattcgtaagg
accctaaatgggcacaagcgtggcatcgcctgtttacagtaccgagacaggctcgtggtg
agcggctcctctgacaacaccatcaggctgtgggacatagaatgtggagcatgcctgcga
gtgttagaaggccatgaggagttggtacgctgcattcgatttgataacaaaaggatagtg
agtggagcctatgatgggaaaattaaagtgtgggatcttatggctgctttggacccgcgt
gctccagcagggactctctgtctgcggacacttgtggagcattctggaagagttttccgc
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaattctcatctgg
gacttcctgaatgatccagctgctcacgctgaaccgccccgctccccttctcggacatac
acctacatctccagataa
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