Mus caroli (Ryukyu mouse): 110285452
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Entry
110285452 CDS
T05910
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110285452 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110285452 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcal03310
]
110285452 (Rorb)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110285452 (Rorb)
Nuclear receptors [BR:
mcal03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110285452 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110285452
NCBI-ProteinID:
XP_021007293
Ensembl:
MGP_CAROLIEiJ_G0022808
UniProt:
A0A6P5P0Q6
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Position
19:complement(16256912..16433704)
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AA seq
470 aa
AA seq
DB search
MCENQPKTKADGTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLSNLNTETGGTYANGHVIDLPKSEGYYSIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagaaccagcccaaaactaaagctgacggcactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctccgggatccactacggagtcatcacgtgtgaaggc
tgcaagggattcttcaggagaagtcagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacaggaaccgttgccaacactgccgcctgcagaag
tgtcttgccctaggaatgtcaagagatgctgtaaagttcgggaggatgtccaagaagcag
cgggacagcctgtatgctgaggtgcagaagcatcagcagaggctgcaggagcagcggcag
cagcagagtggggaggcggaggccctcgccagggtgtacagcagcagcattagcaatggc
ctcagcaacctgaacaccgagaccggcggcacatacgccaacgggcatgtcattgacctg
cccaagtccgaaggttattacagcatagattccggtcagccgtctcccgatcagtcagga
ctggacatgactggaatcaaacagataaagcaagaacctatctatgacctcacgtccgta
cccaacttgtttacctatagctctttcaacaacgggcagttagctcccgggataacaatg
tctgagatcgatcgaattgcacagaacatcattaagtcccatttggaaacatgtcagtac
accatggaagagctccatcagctggcatggcagacccacacctacgaggaaatcaaggcg
tatcaaagcaagtccagggaggctctatggcagcagtgtgccatccagatcacccatgct
atccagtacgtggtggagttcgccaagcggataacaggcttcatggagctgtgtcagaat
gatcagatcttacttctgaagtcaggttgcttggaagtggttttagtgagaatgtgtcgt
gccttcaacccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttcggatgacctagtgaatgaagcatttgactttgcgaagaatctg
tgttccttgcagctgactgaggaggagattgctctgttctcctctgctgttctgatatcc
ccagaccgagcctggctgatcgaaccaagaaaagtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaaccacctggatgatgagaccctggcaaagtta
atagccaagataccaactatcacagcagtctgcaacttgcatggggagaagctgcaagta
tttaagcagtctcatccagacatagtgaatacactgtttcctccattgtacaaggagctc
tttaatcctgactgtgctgcggtctgcaaatga
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