Mus caroli (Ryukyu mouse): 110285565
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Entry
110285565 CDS
T05910
Symbol
Sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110285565 (Sorcs3)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Others
Others
110285565 (Sorcs3)
Endosome - Lysosome transport
110285565 (Sorcs3)
Endosome - Golgi transport
110285565 (Sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
110285565
NCBI-ProteinID:
XP_021007474
Ensembl:
MGP_CAROLIEiJ_G0023065
UniProt:
A0A6P5NW13
LinkDB
All DBs
Position
19:44866501..45460215
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AA seq
1219 aa
AA seq
DB search
MEAAGTERPAGWPGAPLARTGLLLLSTWVLAGAEITWGATGGPGRLVSPASRPPALPPLL
PRAAENRWPEELASARRAAAPRRRSRLEPLSQASRGEIRTEAAGMSPEGARWVPGIPSPS
QAGSARRTRRAQPPSPLERGDAWATALADGAKGSRPHTKGSREEVRATRTGGASAEELRL
PSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSVDYGATYEKL
NDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSVLISSDEGATYQKYRLTFYIQSLLFH
PKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVSGLDKEADLVHMEVRTAD
GYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTIGGRASYYVSYRREAFA
QIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKSSRG
LMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVHCLL
PFCSLHLHLQLSENPYSSGRISSKDTAPGLVVATGNIGSELSYTDIGVFISSDGGNTWRQ
IFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWDKYGFTLLPLFVDGALVEAG
VETHIMTVFGHFSLRSEWQLVKVDYKSIFSRRCTKEDFETWHLLNQGEPCVMGERKIFKK
RKPGAQCALGREYSGSVVSEPCVCADWDFECDYGYERHGESQCVPAFWYNPASPSKDCSL
GQSYLNSTGYRRIVSNNCTDGLRDKYSAKTQLCPGKAPRGLHVVTTDGRLVAEQGHNATF
IILMEEGDLQRTNIQLDFGDGVAVSYANFSPIEDGIRHVYKSAGIFQVTAYAENNLGSDT
AFLFLHVVCPVEHVHLRVPFVAIRNKDVNISAVVWPSQLGTLTYFWWFGNSTKPLITLDS
SISFTFLAEGTNTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQ
DIGNVIKRALIKVTSVPEDQILVAVFPGLPTSAELFILPPKNLTERRKGHEGDLEQIVET
LFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFLI
YKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRVIGS
IATIASSESTKEIPNCTSV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcaggcactgagcgccccgcaggctggcccggggcacccctcgcccggact
gggctgctactcttgtcaacatgggtcctggccggcgccgagatcacttggggcgcgaca
ggaggtccggggcgcctggtgtccccggcttcaagaccaccagcgttgcctcctctcttg
ccacgggcagcggagaaccggtggcctgaggagctggcatctgcacggagagccgctgca
ccgagacgccggtccaggctagagccactatcccaggcgagccgcggggagatacggact
gaagctgcgggaatgtcgcctgaaggcgcgaggtgggtccccggcattccatctcctagc
caggcgggcagcgcgaggaggactcgccgggcgcagcccccaagccccctggagcgcggg
gacgcttgggctactgctctcgcagatggtgccaaaggaagccgtcctcacaccaagggt
tcccgagaggaggtgagggcgacacggactggaggagcgtccgctgaggagctccggctg
cccagcacgtcttttgcactgaccggggactcggctcataaccaagccatggtgcactgg
tcgggacacaacagcagtgtcatactgatcctgacgaagctctatgacttcaacctgggg
agtgtgactgagagttctctgtggaggtcagtagattatggcgccacctatgaaaaactt
aatgacaaagtgggtttgaagaccgtcctcagttatctctatgtcaaccccaccaacaaa
aggaagatcatgctccttagtgaccccgagatggagagcagtgtcctgatcagctcagat
gaaggggcgacctaccaaaagtaccggcttacgttctacatccagagcctgctcttccat
cccaagcaggaggactgggtgctagcctacagcttggaccaaaagctttatagctccatg
gacttcggtagacgatggcaactcatgcatgaacgaatcacgcccaacaggttttactgg
tcggtgtctggactggataaggaggcagacctggtgcacatggaagtgaggacggcagat
ggatatgcccactacctcacctgcagaatccaagaatgtgctgagacaactcggagtggc
ccttttgcccgctccattgacatcagctccttggttgtccaggatgaatatatcttcatt
caggtaacaataggtggacgagccagctactacgtgtcgtatcgaagagaagcctttgcc
cagataaagctgcccaagtactccttgccaaaggacatgcacattatcagtaccgatgag
aaccaagtgtttgcagccgtccaagaatggaaccagaacgacacctacaacctctacatc
tcagacacacgtgggatctactttaccctggctatggagaacattaagagcagccgaggt
ctaatgggaaacatcattattgaattatatgaggtagcaggtatcaaggggatattcctg
gcaaacaagaaggtggatgaccaggtgaagacatacatcacttacaacaaaggcagggac
tggcgtctactgcaagctccagatgtggacctgagaggaagcccagtgcactgtttactg
cccttctgttccctacacttgcatctgcagctctctgaaaacccatattcttctggaaga
atctccagcaaggacacagcgcctggacttgtggttgccacgggtaatattggctcagaa
ctctcctatacggatatcggtgtgttcatctcctctgatgggggcaacacctggagacag
atctttgatgaagaatacaatgtctggttcctagactggggtggtgctctggtggccatg
aagcacacacctctgccagtcaggcatttgtgggtgagttttgatgagggccattcctgg
gacaagtatggtttcacattgctgcctcttttcgtggatggggcgttggtggaggcagga
gtagagacgcacatcatgacagtatttggccacttcagcctgcgctccgaatggcagttg
gtgaaagtggactacaagtctatcttcagccggcgctgtaccaaggaggactttgagact
tggcacctgctcaatcagggagagccttgtgtcatgggggaaaggaaaatattcaagaaa
cgcaagccaggcgctcagtgtgcccttggcagagagtactctgggtcggtggtgtcagaa
ccctgcgtctgtgcggactgggacttcgaatgtgactatggctatgagagacatggagag
agccagtgtgtcccagctttctggtacaacccagcttccccttcaaaggactgcagcctt
ggtcaaagctaccttaacagcactgggtaccggaggattgtatccaacaactgcacagat
gggctaagagataagtattctgctaagactcagttgtgtcctggaaaagctcctcggggc
ctccatgtggtgaccactgacgggcgcctggtggcagaacagggccataatgcaaccttc
atcattctaatggaggagggtgacctccaaaggacaaacatccagcttgactttggagat
ggggtggctgtatcctatgccaacttcagccccattgaggatggcatcaggcatgtgtat
aagagcgcggggatcttccaggtgacagcttatgcggagaacaaccttggctcggacaca
gccttcctcttcctgcacgtggtttgtccagtggaacacgttcaccttcgggttccattc
gtcgccatacggaataaggacgtcaacatcagtgcagttgtgtggcccagtcagctaggg
accctcacctacttctggtggttcggaaatagcacaaagcccctcatcaccttggacagc
agcatctctttcacattccttgcagagggaaccaacaccatcactgtccaggttgctgct
gggaatgccctcatccaagacacaaaagagattgcagtacatgaatacttccagtcacag
ctcttatcgttctctccaaatctggattaccacaatcctgatatccctgagtggaggcaa
gacattggcaatgtcatcaagcgagctctgattaaagtgaccagtgtcccagaagaccag
atcctcgtggctgtgttcccgggtctccccacttcagcagagcttttcattctcccacct
aagaacttgacagagaggaggaaaggccacgaaggggatctagaacaaattgtagagaca
ctatttaatgcgcttaatcaaaacttggtacagtttgagctgaagccaggtgtccaggtc
attgtttatgtcacacagctgacattagctcccctggtggactccagtgctgggcatagc
agctctgccatgcttatgctcctctccgtggtattcgtcggcttggctgtgtttctgatc
tacaagtttaaaaggaaaatcccctggattaacatctatgcccaagtccaacatgacaag
gaacaggagatgatcgggtcagtgagccaaagtgaaaacgcacccaaaatcacactcagt
gacttcacggagcccgaggagctgctggacaaagagctggacacgcgggtcataggaagc
attgccaccattgcaagcagcgagagcacaaaggagatccccaactgtacaagcgtttaa
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