Mus caroli (Ryukyu mouse): 110285626
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Entry
110285626 CDS
T05910
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110285626 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110285626 (Taf5)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110285626 (Taf5)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110285626 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
110285626 (Taf5)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110285626 (Taf5)
STAGA complex
110285626 (Taf5)
TFTC complex
110285626 (Taf5)
SAGA complex
110285626 (Taf5)
SLIK complex
110285626 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
110285626
NCBI-ProteinID:
XP_021007572
Ensembl:
MGP_CAROLIEiJ_G0023049
UniProt:
A0A6P5NW87
LinkDB
All DBs
Position
19:43746350..43761544
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSCGTPNNGPNGGGGGNVAVAAAAGG
DGGTPKPGVAVSATAPAGAAPVPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVPGSAAPEPPGTGASGTSVFSGSSS
GPAAPGKVASVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAIKAFEDLEADDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgcaggctggcgacggcgcaggcgaggggagctgcggcactcct
aacaacggccccaacggcggcggcggcgggaatgtggcagtggcggcggcggccggcggg
gacggcgggacccccaagcctggggtggctgtctccgccactgccccggcgggggcggcc
ccggtgcccgccgctccggcggaggccggcgctccccacgaccgacagaccctcctggcc
gtgctgcagttcctccggcagagcaacctccgcgaggccgaagaggcgctgcgccgggag
gcccggctgctggaggaggcggtggcgggctccggagctccgggagagttggacggggcc
ggcgcggaggcggccagcgcgcttctcagccgggtcaccgcttcagttcccggctctgcg
gcccccgagcctccggggacgggcgcctcggggacctcggtgttctcgggttcatcctca
ggtcctgcggctccgggaaaggttgcaagtgtagctgtggaagaccagccagacgtcagt
gctgtcttgtcggcctacaaccaacaaggagaccctacaatgtatgaagaatactacagt
ggactgaaacacttcattgaatgttctctggactgccatcgagcagagttatcccaactc
ttttatcctctgtttgtacatatgtacttggagctagtttataatcaacatgaaaatgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggagcacatgaaagggaacgagaccatgctggac
tttcggacgagtaaattcgttctccgcatctcccgggactcgtaccaactcttgaagcgg
catcttcaggagaagcagaacaatcagatctggaacatcgtgcaggagcacctctacatt
gacatctttgacgggatgcctcgcagcaagcaacagatagacgccatggtgggcagcctg
gcaggagaggcgaaacgagaggcgaacaaatccaaggtattttttggtttactaaaagaa
ccagaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaagaaggatagcattggctctaaaagcaaaaaacaagatccc
aacgctccgcctcaaaacagaattcctcttcctgagttaaaagattcagacaaactggac
aaaataatgaatatgaaagaaactaccaaacgagtgcgcctcgggccagactgtttaccc
tccatttgtttctatacattccttaatgcttaccagggcctcactgcagtggatgtcact
gatgactctagtctgattgctggaggttttgctgattcaactgtcagagtgtggtctgtg
acccctaaaaagcttcggagtgtcaaacaggcatcagatcttagtcttatagacaaagaa
tcagatgatgtcttagagagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactacctactc
tcctcttcagaggatggaactgttagactctggagccttcagactttcacttgcttggtt
gggtataaaggacacaactacccagtatgggacacacagttttctccatacggatattat
ttcgtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactatcagcct
ttgaggatatttgctggtcatcttgctgatgtgaattgcactagatttcatccaaattcg
aactatgttgctacgggctctgcagacagaactgtacggctctgggatgtccttaatggt
aactgtgtacgaatcttcactgggcacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtacttctttgggatattgga
catggcttgatggttggagaattaaaaggccacactgatacagtgtgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcaatggataacacagtccggttatgggat
gccatcaaagcgtttgaagacttagaggctgatgactttaccacagccaccgggcacata
aatctacctgagaattcccaggagttattattgggtacatatatgaccaaatcaacacca
gtggtacacctacattttacaagaagaaacttggttctagctgcaggagcttacagtccg
caataa
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integrated database retrieval system
