Mus caroli (Ryukyu mouse): 110285665
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Entry
110285665 CDS
T05910
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110285665 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110285665 (Exosc1)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110285665 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110285665 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110285665
NCBI-ProteinID:
XP_021007651
Ensembl:
MGP_CAROLIEiJ_G0022959
UniProt:
A0A6P5P5G3
LinkDB
All DBs
Position
19:complement(38599595..38608511)
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AA seq
199 aa
AA seq
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MVASMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGAVPVVSVM
RETESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKV
EIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPK
THTKEFRKVARVQPEFLQT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaagcatggcaccaccggtgaggtactgcatccccggcgaacgtctgtgtaac
ctggaggaaggcagccccggcagcggcacctacacccggcacggctacatcttttcgtcg
ctggctggctgcttgacgaagaccagcgagaatggcgcggttcccgtggtgtcagtgatg
agagaaacagagtcccagttgcttccagatgtgggagctgtcgtcacctgtaaggtctct
agcatcaactcacggtttgccaaagtacacatcctgtatgtgggatccacaccactcaaa
aatgcttttcgaggaactatccgcaaagaagatatccgagcaactgaaaaagacaaggta
gaaatttacaagagttttcggccaggtgacatagttttggccaaagttatctccctaggt
gacgcacagtccaattacctgctgactactgctgaaaacgaactaggagttgtggtggcc
cacagtgagtcaggtgttcagatggttcccatcagctggtgtgagatgcagtgccccaag
acccacactaaagaattccgaaaagtggcccgagtacagcccgagttcttacagacctaa
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