Mus caroli (Ryukyu mouse): 110285908 Help Entry 110285908         CDS       T05910                                  Symbol Col3a1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04611   Platelet activation mcal04820   Cytoskeleton in muscle cells mcal04926   Relaxin signaling pathway mcal04933   AGE-RAGE signaling pathway in diabetic complications mcal04974   Protein digestion and absorption mcal05146   Amoebiasis mcal05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:mcal00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     110285908 (Col3a1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     110285908 (Col3a1)   09152 Endocrine system    04926 Relaxin signaling pathway     110285908 (Col3a1)   09154 Digestive system    04974 Protein digestion and absorption     110285908 (Col3a1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     110285908 (Col3a1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     110285908 (Col3a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110285908 (Col3a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110285908 (Col3a1) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110285908 (Col3a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  110285908 NCBI-ProteinID:  XP_021008327 Ensembl:  MGP_CAROLIEiJ_G0014105 UniProt:  A0A6P5NXW2 LinkDB All DBs Position 1:39696683..39733913 Genome browser AA seq 1464 aa AA seqDB search MMSFVQSGTWFLLTLLHPTLILAQQSNVDELGCSHLGQSYESRDVWKPEPCQICVCDSGS VLCDDIICDEEPLDCPNPEIPFGECCAICPQPSTPAPVPPDGHGPQGPKGDPGPPGIPGR NGDPGLPGQPGLPGPPGSPGICESCPTGGQNYSPQFDSYDVKSGVGGMGGYPGPAGPPGP PGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGALGPSGPAGKDGESGRPGRPGE RGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGP RGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS NGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLIGARGPPGPAGT NGIPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGA AGERGPSGFRGPAGPNGIPGEKGPPGERGGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGS PGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG PGLPGPAGKNGETGPQGPPGPTGPAGDKGDSGPPGPQGLQGIPGTSGPPGENGKPGEPGP KGEVGAPGTPGGKGDSGAPGERGPPGTAGNPGLRGGAGPPGPEGGKGPAGPPGPPGTSGS PGLQGMPGERGGPGSPGPKGEKGEPGGAGADGVPGKDGPRGPAGPIGPPGPAGQPGDKGE GGSPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGP AGPTGGSGPAGPPGPQGVKGERGSPGGPGTAGFPGGRGLPGPPGNNGNPGPPGPSGAPGK DGPPGPAGNSGSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGP PGMPGPRGSPGPQGIKGEGGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQ PGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPSGAPGPAGA RGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAIGSPGPAGPRGP VGPHGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGGA AAIAGVGGEKSGGFSPYYGDDPMDFKINTEEIMSSLKSVNGQIESLISPDGSRKNPARNC RDLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPMTVPRKHWWTDSGVE KKHVWFGESMNGGFQFSYGPPDLPEDVVDVQLAFLRLLSSRASQNITYHCKNSIAYMDQE NGNVKKSLKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYQTRKAMRLPII DIAPYDIGGPDQEFGVDIGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaagtggaacctggtttcttctcacccttcttcatcccactctt attttggcacagcagtccaacgtagatgaattgggatgcagccaccttggtcagtcctat gagtctagagatgtctggaagccagaaccatgtcaaatatgtgtctgtgactcaggatct gtcctttgcgatgacataatctgtgatgaggagccactagactgccccaacccagagatc ccatttggagaatgttgtgcaatatgtccacaaccatctacacctgctcctgtgcctcct gatggtcatggacctcaaggccccaagggagatccaggtcctcctggcattcctgggaga aatggtgaccctggccttccaggacaaccaggtctccctggtcctcctggctcccctgga atctgtgaatcatgtccaactggtggccagaattattctccccaattcgactcatatgat gtcaagtctggagtgggaggaatgggtggctatccgggaccagctggtcccccaggccct ccaggaccccctggttcttctggacatcctggatctcctggttctcctggataccaaggt ccccctggtgaacctggtcaagctggtccagcaggtcctccaggacctcctggtgctctt ggtccatctggtcctgctggaaaggatggagagtcaggaagacccggacgacctggagag cgtggactgcctggacctccaggtatcaaaggcccagctggcatgcctggattccctggt atgaaaggacacagaggctttgatggacgcaatggagaaaagggagaaacaggtgctcct ggactgaagggtgaaaatggtcttccaggagacaacggagctcctggcccaatgggtccc agaggtgctcctggtgagcgaggacgaccaggccttcctggagctgcaggtgctcgaggc aatgatggtgctcggggcagtgacgggcaacctggtccccctggtcctcctggaactgca ggattccctggatcccctggtgctaagggtgaagttggacctgcagggtcccctggctca aatggctctccaggacaaagaggggagcctggaccgcagggacatgctggtgctcaaggg cctcctggccctcctgggaataatggcagtcctggtggaaagggtgaaatgggtccggct ggcattcccggagcccctggactaataggagcaaggggcccccctggaccagcaggaact aatggtatacccggaacacgaggtccttcaggtgaacccggcaagaacggtgctaaggga gagccaggagcacgcggtgaacggggtgaagctggttccccaggaattccaggacctaag ggcgaagatggcaaagatggatcacctggagaacctggtgcaaatggacttccaggagcc gcaggagaaaggggtcctagtggcttccgaggacctgcagggccaaatggcatcccagga gaaaagggtcctcccggagagcgtggtggcccaggtcctgcgggacccagaggagtagct ggagaacctggccgagatggaacccctggaggtccagggatacggggtatgcccggaagt ccaggtggaccaggcaatgatggaaaaccaggacctcctggaagtcaaggagaaagtggt cgccctggtccccctggcccatctggtcccagaggtcagcctggtgtcatgggtttccct ggtcctaaaggaaatgatggtgcccctggcaagaatggagaacggggtggccctggagga cctggccttccaggtcctgctggaaagaatggggagactggacctcagggtcccccagga cctactggcccggctggtgacaagggagattctggaccccctggcccacaaggattacaa ggcatacctggtaccagtggtcctccaggagaaaatggaaaaccaggtgaaccaggtcca aagggtgaagttggtgcacctggaactcctggaggcaagggtgattctggtgcacctgga gaacgtgggcctcctggaacagcaggaaaccctggccttagaggtggagctggaccccct ggccctgagggaggaaagggccctgctggtccccctggccctcctggtacttctggttct cctggtctgcaagggatgccaggggaaagaggaggtcctggaagtcctggcccaaagggt gaaaagggtgaaccaggtggtgcaggtgctgacggagttccaggaaaggatgggccaagg ggtcctgctggccctattggtccccctggcccagctggtcagcctggagataagggtgaa ggtggttcccccggacttccaggtatagctggacctcgaggtggacctggtgagcgaggt gaacatggccctccaggacctgctggcttcccgggtgctcctggacagaatggtgaacca ggtgctaaaggagaaagaggtgcccctggagagaaaggtgaaggaggccctccaggacct gcaggacccactggcggttctggacctgctggtccgcctggtcctcagggtgtaaagggt gaacgcggtagtcctggtggtcctggtactgctggctttcccggtgggcgtggtcttcct ggtcctcctggcaataatggtaatccagggcccccaggacccagtggtgctcctggcaag gacggccctccaggtcctgcaggcaacagtggttctcctggcaaccctggagtagctgga ccaaaaggtgatgctggacagcctggagagaaggggccacctggtgctcagggtcctccg ggatccccaggtccacttggaattgcagggctaactggagcacgaggtcttgctggacca ccaggcatgccaggtccaaggggtagccctggacctcagggtatcaagggtgaaggtgga aaaccaggagccagtggccataatggggaacgcggtcctcctggaccccaaggtcttcct ggtcagcctggtacagctggtgaacctggaagggatggaaaccctggatcagatggtcag ccaggtcgagatggatctcctggtggcaagggtgatcgtggtgaaaatggttctcctggt gccccaggcgctcctggtcatccaggcccacctggtcctgttggtccatctggaaagagt ggtgacagaggagaaactggccctgctggtccttctggtgctcctggtcctgctggagct cgaggtgctccgggtccccaaggtccacgaggtgacaaaggtgaaactggtgaacgtggc tctaatggcatcaaaggacatcgaggattccctggcaatccaggtcctccaggttctcct ggtgctgctggtcaccagggtgcaattggtagtccaggacctgcaggtcccagaggacca gttggaccacatggacctcctggaaaagatggaacaagtgggcatccaggtcctatcgga ccaccagggcctagaggcaacagaggtgaaagaggatctgagggctcgccaggccaccct ggacagccaggaccccctggaccccctggtgcccctggtccctgctgtggtggtggtgct gctgccattgctggagttggaggtgaaaagtctggtggcttttcaccctattatggagac gatccaatggatttcaagatcaacactgaggagatcatgtcttcactcaagtcagttaat ggacaaatagagagtcttataagcccggatggctctcggaaaaaccctgctcggaactgc agagacctgaaattctgccaccctgaacttaagagtggagaatactgggttgatcctaac caaggctgcaagatggatgctataaaagtattctgtaacatggaaactggggaaacatgc ataaatgccagccccatgactgttccacgtaagcactggtggacagattctggtgtagag aagaaacatgtttggtttggagaatctatgaatggtggttttcagtttagctatggccct cctgatcttcctgaagatgtcgttgatgtgcagctggcattcctcagacttctttccagc cgggcctcccagaacattacataccactgcaaaaacagtattgcctatatggatcaggaa aatggcaatgtaaagaagtctctgaagctgatgggatcaaatgaaggcgaatttaaggct gaaggaaacagcaaattcacttacacagttctagaggatggctgtactaaacacactggg gaatggagcaagacagtctttgaatatcaaacacgcaaggcaatgagactacccatcata gatatcgcaccctatgacattgggggtcctgatcaagaatttggtgtggacattggccct gtttgctttttataa

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