Mus caroli (Ryukyu mouse): 110286006
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Entry
110286006 CDS
T05910
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110286006 (Tmc1)
03037 Cilium and associated proteins [BR:
mcal03037
]
110286006 (Tmc1)
Transporters [BR:
mcal02000
]
Other transporters
Pores ion channels [TC:
1
]
110286006 (Tmc1)
Cilium and associated proteins [BR:
mcal03037
]
Other cilia and associated proteins
Stereociliary proteins
110286006 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
110286006
NCBI-ProteinID:
XP_021008121
Ensembl:
MGP_CAROLIEiJ_G0022812
UniProt:
A0A6P5P2S8
LinkDB
All DBs
Position
19:complement(18042354..18162951)
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AA seq
770 aa
AA seq
DB search
MHSSNCCPCLLSSTVQIQVEEKEEDTEESSSEEEEDKLPRRESLRPKRKRTRDVINEDDP
EPEPEDEETRKAREKERRRRLRRGAEEEEEIDEEELERLKALLDENRQMIATVKCKPWKM
EKKIEVLKEAKKFVSENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENK
IKAIESQFGSSVASYFLFLRWMYGVNMVLFVLTFSLIMLPEYLWGLPYGSLPRKTVPRAE
EASAANFGVLYDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVL
KAMTKNIGDDGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQ
VEENIHLIRFLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVM
SLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEK
LVKANITLWEANMIKAYNESLSGLSGNTTGAPFFVHPADVPRGPCWETMVGQEFVRLTVS
DVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMG
SFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMP
VLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMV
LTIYYLNATAKGQKAANLDLKKKMKQQALENKMRNKKMAAARAAAAAGGQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaagtaattgctgcccatgtctcctttcttcaacagtgcaaatccaagtggag
gagaaagaagaggatacagaggaaagctcaagtgaagaagaagaagataaactacctaga
agagagagtttgagaccaaagaggaaacggaccagagatgtcatcaatgaggatgaccca
gaaccggagccagaggatgaagaaacaagaaaggcaagagaaaaagaaaggcggaggagg
ctgcggagaggagcggaagaagaagaagaaatcgacgaagaggaattagaacggttaaaa
gcactgctcgatgagaatagacaaatgatcgctactgtcaaatgtaaaccttggaaaatg
gagaagaaaattgaagttctcaaggaagcaaagaaatttgtgagtgagaatgaaggcgct
cttgggaaaggaaagggaaagaagtggtttgcatttaagatgatgatggccaagaaatgg
gcgaaattcctccgagattttgagaacttcaaggcagcttgcgtcccatgggaaaacaaa
atcaaggcaattgaaagtcagtttggttcctcagttgcctcgtacttcctgttcctcagg
tggatgtacggcgtcaacatggttctctttgtgttgaccttcagcctcatcatgttaccg
gagtacctctggggtttaccgtatggcagcttacctaggaaaacagtcccaagagctgaa
gaagcatctgctgccaactttggtgtgttgtatgacttcaatggcctggcacagtactct
gtcctcttttatggctattatgacaataaacgcacgatcggatggctgaatttccggcta
cctctttcctacttcctggtggggattatgtgcattggatacagctttctggttgtcctc
aaagcgatgaccaaaaatattggtgacgatggcggtggcgatgacaacactttcaacttc
agctggaaggtgttctgtagctgggactatctgattggtaaccccgaaacagccgacaac
aagtttaactctatcacaatgaactttaaggaagccatcatagaagagagagccgcccag
gtggaggagaacatccacctcatcagattcctgaggtttctcgctaacttcttcgtgttc
ctaacacttggtgcaagtggatacctcatcttttgggctgtgaagcgatcccaggagttt
gcccagcaagatcctgacacccttgggtggtgggaaaaaaatgaaatgaacatggttatg
tccctcctggggatgttctgtcccacactgtttgacttatttgctgaactagaagattac
catcctctcattgctctgaagtggctcctggggcgcatttttgctcttcttctaggcaac
ttgtatgtattcattctcgccttgatggatgagattaacaacaagattgaagaggagaag
ctcgtgaaggccaatattaccctgtgggaagccaacatgattaaggcttacaatgaatct
ctctctgggctctctgggaacaccacaggagcaccctttttcgttcatcctgcagatgtc
cctcgaggtccctgctgggaaacaatggtggggcaggaatttgtgcgtctcaccgtttct
gacgtcctgaccacttatgtcacaatcctcattggcgacttcctcagagcatgtttcgtg
aggttctgcaattactgctggtgctgggacttagaatatggatatccttcatacacagaa
ttcgacatcagtggcaacgtcctcgctctgatcttcaaccaaggcatgatctggatgggc
tccttcttcgctcctagcctcccaggcatcaacatcctccgtctccacacatccatgtat
ttccagtgctgggctgtgatgtgctgtaatgttccagaggccagggtgttcaaagcttcc
agatccaacaacttctaccttggcatgctgctactcatcctcttcctgtccaccatgccg
gtcctgtacatgattgtctcccttccgccatcttttgattgcgggcccttcagtggtaaa
aacaggatgtttgaagtcatcggtgagaccctggaacatgacttcccaagctggatggcg
aagatcctgaggcagctttctaaccctggccttgtcattgctgtcattctggtgatggtc
ctgaccatctattatctcaatgctactgccaagggccagaaagcagcaaatctggatctc
aaaaagaagatgaaacagcaagctttggagaacaaaatgcgaaacaagaaaatggcagcg
gctcgagcagctgcagctgctggtggccagtaa
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