Mus caroli (Ryukyu mouse): 110286070
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Entry
110286070 CDS
T05910
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
mcal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110286070 (Syvn1)
04120 Ubiquitin mediated proteolysis
110286070 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110286070 (Syvn1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110286070 (Syvn1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110286070 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110286070
NCBI-ProteinID:
XP_021008189
Ensembl:
MGP_CAROLIEiJ_G0022583
UniProt:
A0A6P5P2Z3
LinkDB
All DBs
Position
19:2832902..2840013
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AA seq
612 aa
AA seq
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MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPQ
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPPTSAAVSRPSGAA
TTTAAGTSTSAPAPGSVPGPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEET
ASPVVSAAPSTSTPSSEAPTPSPGASPPIPEAEKPPAPESVGIAEELPEDGEPDAAELRR
RRLQKLESPVAH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcagccagcctggcgctgaccggggcagtggtggct
cacgcctactacctcaaacaccagttctaccccactgtagtgtatttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttcttcgggcagctgagggcagcagagatggagcaccttctggagcgg
tcctggtatgctgtcacggagacttgtttggccttcaccgtttttcgggatgacttcagc
cctcgctttgtggcactctttacgctgctcctcttcctcaaatgtttccattggttggcc
gaagaccgtgtggactttatggaacgcagccccaacatctcctggctcttccactgccgc
atcgtctctctcatgcttctcctgggtatcctggacttcctcttcgtcagccacgcttat
cacagcatcctgacccgtggggcttctgtgcagctggtatttggcttcgagtacgccatt
ctgatgaccatggtgcttaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccctgggacaacaaggctgtatacatgctctacacggagctgtttacaggc
tttatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacacattc
ccactctttgccattaggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtacccagatgccacc
cccgaggagctccaggcaatggataacgtctgtatcatctgcagagaagaaatggtgact
ggtgctaagagattgccttgcaaccacatctttcacacgagctgcctgcgctcctggttc
cagagacagcagacctgcccgacatgccgtatggatgtcctgcgggcatcgttgccagcc
cagtcaccaccacctcctgagcctgccgaccaaggaccaccccctgcccctcatccccaa
ccgctgctgccacagccccctaatttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcccccaatgggtccctttccacctgtcccgcctcccccaagctca
ggagaggctgcggcccctccacccaccagtgcagccgtttctcggcctagtggagcagcc
accaccacagctgctggcaccagtacttctgccccagcacctggctctgtacctggccca
gaggctggtcctgcccctggcttccctttccctcctccttggatgggtatgcctctgcct
ccaccttttgccttccccccaatgcctgtaccccctgcgggctttgctggcctaacccca
gaggagctgcgagcgctagagggccatgagagacagcacctggaggcccggctgcagagt
ctgcgcaacatacatacactactggatgctgccatgcttcaaatcaaccagtacctcact
gtgctggcctccctggggccccccaggccagctacttcagtgaaccccactgaagagact
gcctctccagtggtatctgctgccccttccaccagcacccccagctctgaggctcctacc
ccgtctccgggagcttccccaccaattcctgaagcagaaaagcctcctgctcctgagtcg
gtgggcattgcagaggagcttcccgaggacggagagcctgatgccgcagaactccgccgg
cgtcgcctgcagaagctggagtcccccgttgcccactga
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