Mus caroli (Ryukyu mouse): 110286073
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Entry
110286073 CDS
T05910
Symbol
Lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04150
mTOR signaling pathway
mcal04310
Wnt signaling pathway
mcal04928
Parathyroid hormone synthesis, secretion and action
mcal05010
Alzheimer disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05200
Pathways in cancer
mcal05224
Breast cancer
mcal05225
Hepatocellular carcinoma
mcal05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110286073 (Lrp5)
04150 mTOR signaling pathway
110286073 (Lrp5)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
110286073 (Lrp5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110286073 (Lrp5)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110286073 (Lrp5)
05226 Gastric cancer
110286073 (Lrp5)
05224 Breast cancer
110286073 (Lrp5)
09164 Neurodegenerative disease
05010 Alzheimer disease
110286073 (Lrp5)
05022 Pathways of neurodegeneration - multiple diseases
110286073 (Lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110286073 (Lrp5)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110286073 (Lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
EGF
Insulin_TMD
Podoplanin
Motif
Other DBs
NCBI-GeneID:
110286073
NCBI-ProteinID:
XP_021008193
Ensembl:
MGP_CAROLIEiJ_G0022469
UniProt:
A0A6P5P0W9
LinkDB
All DBs
Position
19:complement(331019..436752)
Genome browser
AA seq
1611 aa
AA seq
DB search
METAPTRAPPPPLLLLVLCCSLVPAAASPLLLFANRRDVRLVDAGGVKLESTIVASGLED
AAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYW
TDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAPRIERAGMDGS
TRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALT
LSGDTLYWTDWQTRSIHACNKWTGEQRKEILSALYSPMDIQVLSQERQPPFHTPCEEDNG
GCSHLCLLSPRDPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTPDFTD
IVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVD
WVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKI
ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRQTLLEDK
LPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNP
CADGNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIIPEAFLVFTSRATIHRISLETNN
NDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMA
VDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKP
RIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERMVIADD
LPYPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLN
DCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSPPSTFLLFSQKFAISRMIPDDQ
LSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQNIKRAKDDGTQPSMLTSPSQSLSPDR
QPHDLSIDIYSRTLFWTCEATNTINVHRLDGDAMGVVLRGDRDKPRAIAVNAERGYMYFT
NMQDHAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGA
NRLTLEDANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVTHLTGIHAV
EEVSLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQF
ACTTGEIDCIPGAWRCDGFPECADQSDEEGCPVCSASQFPCARGQCVDLRLRCDGEADCQ
DRSDEANCDAVCLPNQFRCTNGQCVLIKQQCDSFPDCADGSDELMCEINKPPSDDIPAHS
SAIGPVIGIILSLFVMGGVYFVCQRVMCQRYTGASGPFPHEYVGGAPHVPLNFIAPGGSQ
HGPFPGIPCSKSVMRSMSLGGGRGSVPLYDRNHVTGASSSSSSSTKATLYPPILNPPPSP
ATDPSLYNVDMFYSSGIPATARPYRPYVIRGMAPPTTPCSTDVCDSDYSTSRWKTSKYYL
DLNSDSDPYPPPPTPHSQYLSAEDSCPPSPVTERSYCHLFPPPPSPCTDSS
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggcgccgacccgggcccctccgccgccgctgctgctgctggtgttgtgctgc
agcctggtccccgccgcggcctcaccgctcctgttgtttgccaaccgccgggatgtgcgg
ctagtggatgccggcggagtgaagctggagtccaccattgtggccagtggcctggaggat
gcagctgctgtagacttccagttctccaagggtgctgtgtactggacagatgtgagcgag
gaggccatcaaacagacctacctgaaccagactggagctgctgcacagaacattgtcatc
tcaggccttgtgtcacctgatggcctggcctgtgactgggttggcaagaagctgtactgg
acggactccgagaccaaccgcattgaggtggccaacctcaatgggacgtcccgtaaggtt
ctcttctggcaggacctggaccagccaagggccattgccctggatcctgcacatgggtac
atgtactggactgactggggggaagcaccccggatcgagcgggcagggatggatggcagt
acccggaagatcattgtagactccgacatttactggcccaatgggctgaccatcgacctg
gaggaacagaagctgtactgggccgatgccaagctcagcttcatccaccgtgccaacctg
gacggctccttccggcagaaggtggtggagggcagcctcactcacccctttgccctgacg
ctctctggggacacactctactggacagactggcagacccgctccatccacgcctgcaac
aaatggacaggggagcagaggaaggagatccttagtgctctgtactcacccatggacatc
caggtgctgagccaggagcggcagcctcccttccacacgccatgcgaggaggacaacggc
ggctgctcccacttgtgcctgctgtccccgagggatcctttctactcctgtgcctgcccc
actggcgtgcagttgcaggacaatggcaagacgtgtaaggcaggggctgaggaagtgctg
ctgctggctcggaggacagacctgaggaggatctctctggacacccctgacttcacagac
atagtgctgcaggtgggcgacatccggcacgccattgccatcgactacgatcccctggag
ggctacgtgtactggaccgacgatgaggtgcgggctatccgcagggcgtacctggatggc
tcaggtgcgcagacacttgtgaacactgagatcaatgaccccgatggcattgctgtggac
tgggtcgcccggaacctctactggacagatacaggcactgacagaatcgaggtgactcgc
ctcaacggcacctcccgaaagatcctggtatctgaggacctggacgaacctcgggccatt
gtgttgcaccctgtgatgggcctcatgtactggacagactggggggagaaccccaaaatt
gaatgcgccaacctagatgggagagatcggcatgtcctggtgaacacctcccttgggtgg
cccaacggactggccctggacctgcaggagggcaagctgtactggggggatgccaaaact
gataaaatcgaggtgatcaacatagatgggacaaagcggcagaccctgctcgaggacaag
ctcccacacatttttgggttcacactgctgggggacttcatctactggaccgactggcag
agacgcagtattgaaagggtacacaaggtcaaggccagccgggatgtcatcatcgatcaa
ctccccgacctgatgggactcaaagcggtgaatgtggccaaggttgtcggaaccaaccca
tgtgcggatggaaatggagggtgcagccatctgtgcttcttcaccccacgtgccaccaag
tgtggctgccccattggcctggagctgttgagtgacatgaagacctgcataatcccggag
gccttcctggtattcaccagcagagccaccatccacaggatctccctggagactaacaac
aacgatgtggctatcccactcacgggtgtcaaggaggcctctgcactggactttgatgtg
tccaacaatcacatctactggactgatgtcagcctcaagacgatcagccgagccttcatg
aatgggagctcggtggagcacgtgattgagtttggccttgactaccctgaaggaatggct
gtggactggatgggcaagaacctctattgggcggacacagggaccaacaggattgaggtg
gcccggctggatggacagttccggcaggtgcttgtgtggagagaccttgacaaccccagg
tctctggctctggatcctactaaaggctacatctactggactgagtggggcggcaagcca
aggattgtgcgggccttcatggatgggaccaattgtatgacactggtagacaaggtgggc
cgggccaacgacctcaccattgattatgccgaccagcgactgtactggactgacctggac
accaacatgattgagtcttccaacatgctgggtcaggagcgcatggtgatagctgacgat
ctgccctacccgtttggcctgactcaatatagcgattacatctactggactgattggaac
ctgcatagcattgaacgggcggacaagaccagcgggcgaaaccgcaccctcatccagggt
cacctggacttcgtcatggacatcctggtgttccactcctcccgtcaggatggcctcaac
gactgtgtgcacagcaatggccagtgtgggcagctgtgcctcgccatccccggaggccac
cgctgtggctgtgcttcacactacacgctggaccccagcagccgcaactgcagcccgccc
tccaccttcttgctgttcagccagaaatttgccatcagccggatgatccccgatgaccag
ctcagcccggaccttgtcctaccccttcatgggctgaggaacgtcaaagccatcaactat
gacccgctggacaagttcatctactgggtggacgggcgccagaacatcaagagggccaag
gacgacggtacccagccctccatgctgacctctcccagccaaagcctgagcccagacaga
cagccacacgacctcagcattgacatctacagccggacactgttctggacctgtgaggcc
accaacaccatcaatgtccaccggctggatggggatgccatgggagtggtgcttcgaggg
gaccgtgacaagccaagggccattgctgtcaatgctgagcgagggtacatgtactttacc
aacatgcaggaccatgctgccaagattgagcgagcctccctggatggcacagagcgggag
gtcctcttcaccacaggcctcatccgtcccgtggcccttgtggtggacaatgctctgggc
aagctcttctgggtggatgcagacctaaagcgcatcgaaagctgtgacctctccggggcc
aaccgcctgaccctggaagatgccaacatcgtacagccagtaggtctgacagtgctgggc
aggcacctctattggatcgaccgccagcagcagatgatcgagcgcgtggagaagaccact
ggggacaagcggactagggttcagggccgtgtcacccacctgacaggcatccatgccgtg
gaggaagtcagcctggaggagttctcagcccatccgtgtgcccgagacaatggtggctgc
tcccacatctgcatcgccaagggtgatggaacgccacgctgctcgtgccctgtccacctg
gtgctcctgcagaacctgctgacttgtggtgagcctcctacctgctcccctgatcagttt
gcatgtaccactggtgagatcgactgcatccccggagcctggcgctgtgacggcttccct
gagtgtgctgaccagagtgatgaagaaggctgcccagtgtgctccgcctctcagttcccc
tgtgctcgaggccagtgcgtggatctgcggttacgctgcgacggtgaggccgactgccag
gatcgctctgatgaagctaactgtgatgctgtctgtctgcccaatcagttccggtgcacc
aacggccagtgcgtcctcatcaagcaacagtgtgactccttccccgactgtgctgatggg
tctgatgagctcatgtgtgaaatcaacaagccaccctctgatgacatcccagcccacagc
agtgccattgggcccgtcattggtatcatcctctccctcttcgtcatgggcggggtctac
tttgtctgccagcgtgtgatgtgccagcgctacacaggggccagtgggccctttccccac
gagtatgtcggtggagcccctcatgtgcctctcaacttcatagccccaggtggctcacag
cacggtcccttcccaggcatcccgtgcagcaagtccgtgatgcgctccatgagcctgggg
ggggggcgtggcagcgtacccctatatgaccggaatcacgtcactggggcctcatccagc
agctcgtccagcacaaaggccacactatatccgccgatcctgaacccacccccgtcccca
gccacagacccctctctgtacaacgtggacatgttttattcttcaggcatcccggccacc
gctagaccatacaggccctacgtcattcgaggtatggcacccccaacaacaccttgcagc
acagatgtgtgtgacagtgactacagcaccagtcgctggaagaccagcaaatactacctg
gacttgaattcggactcagacccctacccacccccgcccactccccacagccagtatcta
tctgcagaggacagctgcccaccctcaccagtcactgagagaagctactgccacctcttc
ccacccccaccgtccccctgcacggactcttcctga
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integrated database retrieval system
