Mus caroli (Ryukyu mouse): 110286102
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Entry
110286102 CDS
T05910
Symbol
Myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110286102 (Myof)
Membrane trafficking [BR:
mcal04131
]
Endosome - Lysosome transport
Others
Ferlins
110286102 (Myof)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
110286102
NCBI-ProteinID:
XP_021008221
Ensembl:
MGP_CAROLIEiJ_G0022919
UniProt:
A0A6P5P6Z0
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All DBs
Position
19:complement(34471829..34618999)
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AA seq
2061 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
SSSSLVIVVKDFETIGQNKLIGTATVSLKDLIGDQNRSLPYKQTSLLNEKGQDTGATIDL
VIGYTPPSAPHPNDPSGTSVPGMGEEEEEDQGDEDRVDGIVRGPGPKGPSGTVSEAQLAR
RITKGKNSRRMLSNKPQDFQIRVRVIEGRQLCGNNIRPVVKVHICGQTHRTRIKRGNNPF
FDELFFYNVHITPSELMDEIISIRVYNSHSLRADCLMGEFKIDVGFVYDEPGHAVMRKWL
LLNDPEDTSSGAKGYMKVSMFVLGTGDEPPPEKRDRDNDSDDVESNLLLPAGIALRWVTF
MLKIYRAEDIPQMDDAFSQTVKEIFGGNADKKNLVDPFVEVSFAGKKVCTNIIERNANPE
WNQVVNLQIKFPSMCEKIKLTVYDWDRLTKNDVVGTTYLYLSKIAASGGEVEDFSSSGAG
AASYTATTGETEVGFVPTFGPCYLNLYGSPREYTGFPDPYDELNSGKGEGVAYRGRIFVE
LNTFLEKKPPEKKLEPISSDDLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIG
NYGNKFDATCKPLASTTQYSRAVFDGNYYYYLPWAHTKPVVTLTSYWEDISHRLDAVNTL
LVMAERLQSNIEAVKSGIQGKIPANQLAEVWLKLIDEVIEDTRYTLPVTEGKANVTVLDT
QIRKLRSRFLSQIHEAALRMRSEATDVKSTLLEIEEWLDKLMQLTEEPQNSMPDIIIWMI
RGEKRLAYARIPAHQVLYSTSGGNASGKYCGKTQTILLKYPQEKNNGPKVPVELRVNIWL
GLSAVEKKFNSFAEGTFTVFAEMYENQALVFGKWGTSGLVGRHKFSDVTGKIKLKREFFL
PPKGWEWEGDWVVDPERSLLTEADAGHTEFTDEVYQNENRYPGGEWKQAEDTYTDANGDK
AASPSEMTCPPGWEWEDDAWIYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHTHRR
RRLVRKRKKDLTQTASSTARAMEELEDREGWEYASLIGWKFHWKQRSSDTFRRRRWRRKM
APSETHGAAAIFKLEGALGADTTEDGDEKGPEKQKHSATTVFGANTPIVSCNFDRVYIYH
LRCYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDEVEIFGE
PQTVLQNPPNVTIELFDNDQVGKDEFLGRSICSPLVKLNSETDITPKLLWHPVMNGDKAC
GDVLVTAELILRNKDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQ
MASVTSPSLVVECGGERVESVVIKSLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDH
RQFGRKPVVGQCTIDHLDRFRCDPYAGKEDIVPQLKASLMSAPPCREVVIEIEDTKPLLA
SKLSEKEEEIVDWWSKFYASSGEHEKCGQYIQKGYSKLKIYDCELEDVADFEGLTDFSDT
FKLYRGKSDENEDPSVVGEFKGSFRIYPLPDDPGVPAPPRQFRELPDSVPQECTVRIYIV
QGLQLQPQDNNGLCDPYIKITLGKKVIEDRDHYIPNTLNPVFGRMYELSCYLPQEKDLKI
SVYDYDTFTRDEKVGETTIDLENRFLSRFGSHCGIPEQYCVSGVNTWRDQLRPTQLLQNV
ARFKGFPPPVLSEDGSRIRYGGRDYHLDEFEANKILHQHLGAPEERLALHILRTQGLVPE
HVETRTLHSTFQPNICQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYYLRVIIWNTKDV
ILDEKSITGEDMSDIYVKGWISGSEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQL
CIVAKKEHFWSIDQTEFRVPPRLIIQIWDNDKFSLDDYLGFLELDLHRTIIPAKTSEKCS
LDMIPDLKAMDPLKAKTASLFEQRSMKGWWPCYADKDGARVMAGKVEMTLEVLNEREADE
RPAGKGRSEPNMNPKLDPPNRPETSFLWFTNPCKTMRFIVWRRFKWVIIGLLLLLILLLF
VAVLLYSLPNYLSMKIVRPNA
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgagtgattgtggaatctgccactaacatccctaaaacaaaatttgggaagccg
gatcctatcgtttctgtcatttttaaggatgagaaaaagaaaacaaagaaagttgataat
gaactcaaccctgtctggaatgagattttggaatttgacttgagggggataccactggac
tcatcatcttccctggtgattgttgtcaaagattttgagacaattggacaaaataaatta
attggcacagcaactgtctccctgaaggacctgattggggaccagaacaggtctttgccc
tacaaacagacctccctgctaaatgaaaagggacaagacactggggccaccattgacctg
gtgatcggctataccccaccttcggctccacatccaaatgatccgagcgggaccagtgtg
ccaggcatgggagaagaagaggaagaagatcaaggagatgaagacagggtagatggcata
gtcagaggccctgggcccaaggggccatctgggacagtgtcagaagctcagctggctcgg
aggatcaccaaagggaagaacagccggaggatgctgtccaacaagccacaggatttccag
atccgtgtcagagtgatcgagggccgtcagttatgcggcaacaacataaggcccgtggtg
aaagttcacatctgtggtcagacgcaccgcacgagaatcaagagagggaacaatccattt
tttgacgagttatttttctacaatgtacacatcacaccctctgagctcatggatgagatc
atcagtatccgggtttataattcccattctttgagggcagattgtctgatgggggaattt
aagattgatgttggatttgtttatgatgaacctggccatgctgtcatgaggaaatggctc
cttctcaatgacccagaagacaccagctcaggcgcaaaaggttacatgaaagtcagcatg
tttgtcctgggaaccggagacgaaccccctcctgagaaacgagaccgtgacaatgacagt
gatgacgtggagagcaacttgttacttccggcaggcattgccctccggtgggtgaccttc
atgctgaagatctaccgagccgaggacatcccccagatggatgatgccttctcacaaaca
gtgaaggaaatatttggtggcaacgcagataaaaaaaatcttgtggatccttttgtagaa
gtctcctttgctgggaaaaaggtgtgcacaaatataattgagaggaatgcaaaccctgaa
tggaatcaagttgtcaatcttcagatcaagtttccctccatgtgtgaaaaaataaaacta
acagtttatgactgggaccggcttactaaaaatgatgtagttggaaccacgtacctgtac
ctctctaaaattgctgcctctgggggagaagtggaagatttctcatcctcgggagctggg
gctgcgtcatatacagcaacgacaggagagacagaggtggggtttgtcccaacattcgga
ccttgttatttgaacctttacggaagccccagagagtacacaggatttccagatccctat
gatgagctgaactcaggaaagggagaaggggtggcctacagaggcaggatcttcgtggaa
ctgaacacgttccttgaaaagaagccaccagaaaagaagctggagcccatttccagtgac
gaccttctggttgttgagaaataccagcgaaggcggaagtacagcctgtccgccgtgttc
cattcagccaccatgttgcaagatgttggtgaggccattcagtttgaagtcagcattggg
aactatggcaacaagtttgatgcaacctgtaaacctttggcatcaaccactcaatacagc
cgtgcagtatttgacgggaactactattactacttaccttgggcccacacgaagcccgtt
gtcaccctgacttcctactgggaggatattagtcaccgcctggatgcagtgaacactctg
ctagtcatggcagaacggctgcaatcaaacatagaggctgtaaaatcagggatccagggt
aaaattcctgcaaaccagttggcggaggtgtggctgaagctgatagatgaagttatagaa
gacacgagatacaccttgcctgtcacagaaggaaaagccaacgtcacggttctggatact
cagatccgaaagttgcggtccaggtttctttcccagatacacgaggcagctctgaggatg
agatctgaagccacggatgtgaaatccaccttgttggaaattgaggagtggcttgataaa
ctgatgcagcttactgaagagcctcagaacagcatgcctgacatcatcatctggatgatc
cgtggagagaaaagactggcttatgcacgaatccctgcccaccaagtcttgtactccacc
agcggtgggaacgcctctggaaaatactgtgggaaaacccaaaccatccttctgaagtat
ccacaagaaaaaaacaatgggcccaaagtacctgtggagctgcgcgtgaacatctggctg
ggtttaagtgctgtggaaaagaagttcaatagcttcgcggaaggcaccttcaccgtcttt
gctgaaatgtatgaaaaccaagcccttgtgtttgggaagtggggcacctctggactggtg
ggacgccataaattctctgatgtcacaggaaaaataaaactcaagagagaattcttttta
cctcccaaaggctgggaatgggaaggagactgggtggttgaccctgaacgaagcctcctg
actgaggctgacgcaggtcacaccgagttcactgatgaagtctaccagaatgagaatcgc
taccccggaggcgagtggaagcaggcagaggacacctatacggatgcgaatggagataag
gcggcatcccccagtgagatgacctgccctccaggttgggagtgggaggatgacgcatgg
atatatgacataaatcgagcagtggatgagaaaggctgggagtatgggattaccattcct
cctgataataagcccaaatcctgggttgcagcagaaaagatgtatcacactcacaggagg
cggagactagtccgaaaacgcaagaaagatctgacacagacggcttctagtaccgcaagg
gccatggaagaacttgaagaccgggagggctgggaatatgcttcgttaatcggctggaaa
ttccactggaaacagcgcagttcagacacctttcgccgcaggcgctggaggaggaaaatg
gctccttctgagacacacggtgccgctgccatctttaaactcgaaggtgcccttggggca
gacaccacagaggatggagatgagaagggcccggagaagcagaagcacagcgccaccact
gtgtttggagcaaacacgcccattgtttcctgtaatttcgacagagtctacatctaccac
ctgcgctgctacatttatcaagccaggaacctcatggctttggacaaagacagcttttca
gatccatacgcccatgtctccttcctccatcgaagcaaaaccactgagatcatccactcc
accctgaatcccacctgggaccaaaccattatattcgatgaggttgaaatctttggggaa
ccccaaacagttctacagaacccacccaacgttaccatagaactttttgacaatgaccaa
gtgggcaaagatgaatttttaggtcgaagcatttgctctcccttggtgaaactgaactca
gaaacggacatcacacctaagcttctctggcatcctgttatgaatggagacaaggcctgt
ggggatgtcctcgtaacagcagagttgattctgaggaacaaggatggctccaaccttccc
atcctcccctctcaaagagcaccaaacttatacatggtccctcaggggatcaggcctgtg
gttcagctcactgccattgagatcctagcttggggcttaagaaatatgaaaaactaccag
atggcttctgtcacatcgcccagcctggtggtggaatgtggaggagagagagtagaatcg
gtggtgatcaaaagccttaagaagacacccaacttcccaagttctgttctcttcatgaaa
gtgttcttgcccaaggaagaattgtacatgcctccgctggtgatcaaggtcattgatcac
aggcagtttgggcggaagcctgtggttggccaatgcaccattgaccacctggaccgcttt
cggtgtgatccatatgcaggaaaggaggatattgtaccacaactaaaagcctctctgatg
tctgcacctccatgccgggaagtcgttattgaaatagaagacaccaaaccattactggct
tctaagctgtcggaaaaggaggaagaaatcgttgactggtggagtaaattttatgcttcc
tctggagagcatgaaaaatgtggacagtatattcagaaaggctattccaaactcaagatc
tatgactgtgaactggaggatgtagccgactttgaaggcctgacagatttctcagatacc
ttcaagctgtacagaggcaagtccgatgagaatgaagatccatctgtggtaggagagttt
aaaggctccttccgaatctaccccttgccggatgaccccggtgtgccagcccctcccagg
cagtttcgggaactgcctgacagtgtcccacaggaatgcactgttaggatttacattgtt
caaggcttacagctccagcctcaggacaacaatggcctgtgtgatccttacataaaaata
accttgggcaagaaagtaattgaagaccgagaccactacattcccaacactctcaaccca
gtgtttggcagaatgtatgagctgagctgctacttgcctcaggagaaagacctgaagatc
tctgtctatgactacgacaccttcacccgagatgagaaggtgggagagacaaccattgac
ctggagaaccgcttcctttcccggttcgggtctcactgtggaatccctgagcagtactgt
gtttccggagtaaatacctggcgagatcagctgagaccgacgcagttgcttcaaaacgtt
gcaagattcaaaggcttcccgccaccagttctttctgaagacggaagcagaatccgatac
ggagggcgagactaccatttggatgagtttgaggccaacaaaatcctgcaccagcacctt
ggagcccccgaagagcgtcttgccctccatattctcaggactcaggggctggtccctgag
cacgtggagacaaggactttgcacagcaccttccagcccaatatttgccagggaaaactt
cagatgtgggtggatgttttccccaagagtttaggaccaccaggcccccctttcaacatc
acgcccaggaaagccaagaagtactacctgcgtgtgatcatctggaataccaaggatgtt
atcttggatgagaagagcatcactggggaggacatgagtgacatctacgtcaaaggctgg
atttccggcagcgaagaaaacaaacagaaaacagatgtccactacaggtccttggatggt
gaaggcaattttaactggagatttgttttcccatttgactacctccctgctgagcagctc
tgtatagtcgctaaaaaagagcatttctggagtattgatcaaacagaatttcgagtccct
cctcggctgatcattcagatatgggacaatgacaagttttccctggacgactacttgggt
tttctggaacttgacttacatcgtacgatcatcccagccaagacatcagagaaatgcagt
ttggacatgattccagacctcaaagccatggaccctcttaaagctaagactgcctcactc
tttgaacagcggtccatgaaaggatggtggccgtgctacgcagacaaagatggcgcccgg
gtgatggctgggaaagtggagatgacactggaggtgctcaacgagagggaggccgacgag
aggccagccgggaaggggcggagtgaacccaacatgaaccccaagcttgacccaccaaac
cgaccggaaacctccttcctctggttcacgaacccttgcaagaccatgcgcttcattgtg
tggcgccggttcaagtgggtgatcatcggcctgcttctgctgctcatcctgttgctgttc
gtggctgtgctcctgtactctcttccgaactatttatcaatgaagattgtgaggccgaat
gcataa
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integrated database retrieval system
