Mus caroli (Ryukyu mouse): 110286657
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Entry
110286657 CDS
T05910
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110286657 (Fmr1)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110286657 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
110286657 (Fmr1)
mRNA cycle factors
Stress granule specific factors
110286657 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
110286657
NCBI-ProteinID:
XP_021008829
Ensembl:
MGP_CAROLIEiJ_G0033121
UniProt:
A0A6P5P2F6
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All DBs
Position
X:63488697..63526280
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AA seq
614 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKSVPQEEEIMPPSSLPSNNSRVGPNSSEEKKHLDTKE
NTHFSQPNSTKVQRVLVVSSIVAGGPQKPEPKAWQGMVPFVFVGTKDSIANATVLLDYHL
NYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRGH
GRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQ
GGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTADGSLQSSSSEGSRLRTGKDRNQKKEKP
DSVDGLQPLVNGVP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggcgctttctacaaggcatttgta
aaagatgtccatgaagattctataacagttgcttttgaaaacaactggcaaccagagaga
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaac
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacgtataatgaaattgtcacaattgagcgtctacgatctgttaatcccaacaaacct
gctacaaaagatactttccataaaatcaagctggaggtgccagaagatttacgacaaatg
tgtgccaaagaatcagcacataaggattttaaaaaggcagttggtgccttctctgtaact
tatgatccagaaaattatcagctggtaattttgtccatcaatgaagtcacctcaaagcga
gcccacatgttgattgacatgcactttcgaagtctgcgtaccaagttgtctcttatactg
agaaatgaagaagccagtaaacaactggagagttcaaggcagcttgcctcaagatttcat
gaacagtttatcgtacgagaagatctgatgggtttagctattggtactcatggtgctaat
attcagcaagctagaaaagtacctggcgtcactgctattgatttagatgaggatacctgc
acatttcatatttatggagaggatcaagatgcagtgaaaaaggctagaagctttctggaa
tttgctgaagatgtcatacaggttccacgaaacttagtaggcaaagtaataggaaaaaat
ggaaagctgattcaagagatcgtggacaagtcaggagttgtgagggtgaggattgaggct
gaaaatgagaaaagtgtcccacaagaagaggaaattatgccaccaagttccctaccttcc
aataattcaagggttggacctaactcctctgaagaaaagaaacatttagatacaaaggaa
aacacccatttttctcaacctaacagtacaaaagtccagagggtgttagtggtttcatca
attgtagcagggggaccccagaaacctgaacccaaggcttggcagggtatggtaccattt
gtttttgtgggaacaaaagacagcatcgctaatgccactgttcttttggattatcacctg
aactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcagttg
cgacaaattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggctat
gtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaatagggggcac
ggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttctgaa
acagaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaagag
agggagagcttcctgcgcagaggagacggacggcggcgtggaggaggaggaagaggacaa
ggaggaagaggaagaggaggaggcttcaaaggaaacgacgatcattcccgaacagataat
cgtccacgtaatccaagagaggctaaaggaagaacagctgatggatccctgcagagttcc
tccagtgaagggagccggctgcgcacgggtaaagatcgtaaccagaagaaggaaaagcca
gacagcgtagatgggctgcaaccgctggtgaatggagtaccctaa
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