Mus caroli (Ryukyu mouse): 110286688
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Entry
110286688 CDS
T05910
Symbol
Smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04110
Cell cycle
mcal04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110286688 (Smc1a)
04114 Oocyte meiosis
110286688 (Smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110286688 (Smc1a)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110286688 (Smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
110286688 (Smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
110286688
NCBI-ProteinID:
XP_021008891
Ensembl:
MGP_CAROLIEiJ_G0033498
UniProt:
A0A6P5P4J1
LinkDB
All DBs
Position
X:140655470..140698735
Genome browser
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgcttggtgaaaagaccagcaacctgagggtaaagacc
ctgcgggacctgatacatggagcacctgtgggcaagccggctgccaaccgagcctttgtc
agcatggtctactcggaggagggtgctgaggaccggacctttgctcgagtcattgtaggg
ggctcttctgaatacaagatcaacaacaaagttgtccagctacatgaatacagtgaagag
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgcagtg
gaatccattgccatgaagaaccccaaggagaggacagctctgtttgaagaaattagtcgc
tctggggaacttgcacaggagtatgacaagcgaaagaaagaaatggtgaaggctgaagaa
gacacacagtttaattatcatcgcaagaaaaatattgcagctgaacgaaaggaggccaaa
caagaaaaggaagaggcggaccgctaccagcgcctgaaggatgaggtagtacgggcacag
gtacagctgcagctctttaaactctaccacaacgaagtggagattgagaagctcaacaag
gaactggcctcgaagaacaaggaaattgagaaggacaagaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaagagctgggaaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggaaaaggactcagaattgaatcagaagaggcctcagtacatcaaa
gcaaaagagaatacatcccacaaaatcaagaagcttgaagcagccaagaagtctcttcag
aatgctcagaaacattataagaaacgtaaaggtgacatggatgagctggagaaggagatg
ctgtcggtggagaaggcccgacaggagtttgaagaacggatggaggaagagagtcagagt
cagggcagagacttgaccctggaggagaaccaggtaaagaaataccaccgattgaaagaa
gaagctagcaagagagcagctactttggctcaggagctggagaagttcaatcgagaccag
aaagctgaccaggaccgtctagatctggaagagcggaagaaagtagaaacagaggccaag
atcaagcaaaaactgcgggagattgaagagaatcagaaacggattgagaagctagaagag
tatattaccactagcaagcagtctctagaggagcagaagaagctagagggagaattgacg
gaagaagtagagatggccaagcgtcgtattgatgagatcaataaggagctgaaccaggtg
atggagcaattaggggatgcacgcattgaccggcaggagagtagccgccagcagcgaaag
gcagaaataatggaaagcatcaagcgtctctaccctggctctgtgtatggccgcctcatt
gacctctgccagcctacacaaaagaagtatcagattgctgtgaccaaggttttaggaaag
aacatggatgctattattgtagactcagagaagacaggtcgggattgtattcagtatatc
aaggagcaacgtggagagcctgagaccttcttgcctcttgactacctggaggtgaaacct
actgatgagaaactccgggagctgaagggggccaagctagtgattgatgtaattcgttat
gaaccacctcacattaaaaaagctctgcagtatgcttgtggcaatgcccttgtttgtgat
aatgtggaggatgctcgacgcattgcttttggaggtcaccaacgccacaagacagtggcg
ttggatggcaccctgttccagaagtcaggagttatctctggtggagccagtgatctcaag
gcaaaagcacggcgctgggatgagaaagcagtagacaaactgaaagaaaaaaaagaacgt
ttgacagaggagctaaaagagcagatgaaggcaaaacggaaagaggcagaactgcgtcaa
gtgcagtctcaggcccatgggcttcaaatgcggctgaagtactcacagagtgacctagaa
cagacgaagacaaggcatcttgccctgaatctccaggaaaagtctaagctggagagtgaa
ctagccaacttcgggcctcgcattaatgatatcaagagaatcatacagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtggaagacgaggtgtttgaagagttt
tgtcgagaaattggtgtgcgtaacatccgagaatttgaggaagaaaaggtgaagcggcag
aatgaaattgccaagaaacgcttggaatttgagaatcagaagactcgcttgggcatccag
ttggattttgaaaagaatcagttgaaggaggaccaggataaagtacatatgtgggaacag
acggtgaaaaaggatgaaaatgagatagaaaagcttaagaaggaggaacaaagacacatg
aagataatagatgaaaccatggctcagcttcaagaccttaagaatcagcacctggccaaa
aagtcagaagtaaacgacaagaatcacgagatggaagagattcgcaagaagcttgggggt
gccaacaaggaaatgactcatttacagaaggaagtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgtaagatgcaggacatcaaattg
ccactgtcaaagggcaccatggatgatattagtcaggaagaaggtagctcccagggagaa
gagtcagtgagtggttcccagagaacatctagtatctatgctcgagaggccctcattgag
attgactacggtgacctgtgtgaagatttgaaggatgcacaggcggaggaagaaatcaag
caagaaatgaacacactccagcaaaagctgaatgagcagcagagtgtgcttcagcggatt
gctgcccctaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgagtttgaagcagcacgaaagcgagcaaagaaggccaagcaggcatttgaa
cagataaagaaggagcgcttcgaccgattcaatgcttgttttgaatctgtggctaccaac
attgatgagatctataaggctctgtcccgtaacagcagtgcccaggcattcttgggccct
gagaatcctgaagagccctatttggatggcatcaactacaactgtgtagctcctggcaaa
cgtttccggcctatggacaatttgtcaggcggggagaagacagttgcagctctggccttg
ctttttgccatccatagctacaagccagcccccttcttcgtcctggatgagattgacgct
gccttggataacaccaacattggcaaggtggcaaattacatcaaggaacagtcaacttgc
aacttccaagccattgttatctctctcaaggaggaattctacaccaaggctgagagcctc
attggagtctatcctgagcaaggggactgtgtgatcagcaaagtcctgactttcgacctc
accaagtacccagatgccaaccccaaccccaatgaacaatag
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