Mus caroli (Ryukyu mouse): 110286792 Help Entry 110286792         CDS       T05910                                  Symbol Hdac6 Name (RefSeq) histone deacetylase 6   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04613   Neutrophil extracellular trap formation mcal05014   Amyotrophic lateral sclerosis mcal05034   Alcoholism mcal05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:mcal00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     110286792 (Hdac6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     110286792 (Hdac6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     110286792 (Hdac6)   09165 Substance dependence    05034 Alcoholism     110286792 (Hdac6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:mcal01009]     110286792 (Hdac6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcal03019]     110286792 (Hdac6)    04131 Membrane trafficking [BR:mcal04131]     110286792 (Hdac6)    03036 Chromosome and associated proteins [BR:mcal03036]     110286792 (Hdac6) Enzymes [BR:mcal01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      110286792 (Hdac6) Protein phosphatases and associated proteins [BR:mcal01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      110286792 (Hdac6) Messenger RNA biogenesis [BR:mcal03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      110286792 (Hdac6) Membrane trafficking [BR:mcal04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     110286792 (Hdac6) Chromosome and associated proteins [BR:mcal03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      110286792 (Hdac6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  110286792 NCBI-ProteinID:  XP_021009042 Ensembl:  MGP_CAROLIEiJ_G0032908 UniProt:  A0A6P5P4W1 LinkDB All DBs Position X:complement(2075958..2093693) Genome browser AA seq 1145 aa AA seqDB search MTSTGQDSSTRQRKSRHNPQSPLQDSSATLKRGGKKCAVPHSSPNLAEVKKKGKMKKLSQ PAEEDLVVGLQGLDLNPETRVPVGTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLIL EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSY SCACLATGSVLRLVDALMGTEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKK HRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQ GYTINVPWNQVGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMSATPA GFAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQ TSISCTLEALEPFWEVLERSVETQEEDEVGEVVLEEEEEEGGWEATALPMDPWPLLQNRT GLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHS AEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLSGEVLNG IAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFE DDPSVLYVSLHRYDRGAFFPMGDEGASSQVGRNAGTGFTVNVPWNGPRMGDADYLASWHR LVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPECYAHLTHLLMGLAGGRIILILEGG YNLASISESMAACTHSLLGDPPPKLTLLRPPQSGALVSISEVIQVHRKYWRSLRLMKMED KEECSSSRLVTKKLPPTASPVSTTPKGKVPEESMRKTIAALPGKESTLGQDKSKTAKAVL AQGQSSEQAAKGTTLDLATSKETVGGATTDLCASAAAPENFPKQTTSVEAVGEPEPTPPT SHTNKQSTGASPLQGVTVQQSLQLGVLSTLELSREAEEAHDSEEGLLGEAAGGQDMNSLM LTQGFGDFNTQDVFYAVTPLSWCPHLMAVCPIPAAGLDVSQPCKTCGTVQENWVCLTCYQ VYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAYVHHEDLQDVKNAAHQNKFGED IPHSH NT seq 3438 nt NT seq  +upstreamnt  +downstreamnt atgacctccaccggccaagattcttctactaggcagcgaaagagtaggcacaatccccag tcaccccttcaggactccagtgccaccttgaagcgtggtggtaagaagtgtgctgtaccc cactccagccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctgagccaa ccagctgaagaggacctagttgtggggcttcaagggctggatctgaacccagagacaaga gtgccagttggtactggattggtgtttgatgaacaactaaatgacttccattgcctttgg gatgacagcttccctgaaagccctgagcggctccatgccatcagagagcaactgatcctg gagggcctcctgggccgctgtgtgtcctttcaggcccggtttgctgagaaggaggagctg atgttggttcacagcctggaatacattgatctgatggagacaacccagtacatgaatgaa ggggagcttcgagtactggcagaaacctatgattcagtgtatctgcatccgaactcatat tcctgtgcctgcctggctacaggctctgtcctcaggctggtagatgcactcatggggact gagattcggaatggcatggccgtcatcaggcctcccggacaccatgctcagcacaatctt atggatgggtattgcatgttcaaccatctggctgtggctgcccgctatgcgcaaaagaag caccgcattcagagggttctcatcgtggactgggatgtgcaccatggtcaagggacacag ttcatcttcgaccaggatcccagtgtcctttatttctccatccaccgatatgaacacggt cgcttctggccccaccttaaggcatctaactggtccactataggttttggccaaggccaa ggatataccatcaatgtaccttggaaccaggtggggatgcgggatgctgactacattgct gctttcctgcacatcctgctgccagttgcctctgagtttcagcctcaactggtcttggtg gccgctggatttgatgccctccacggagaccccaagggagagatgtctgccactccagca ggatttgcccacctaacccatttgctcatgggtttggcaggaggcaagttgattctgtcc ctggagggtggctataacctccgtgccctggctaagggggtcagtgcttcactccacacc cttcttggagacccttgccccatgttggagtcctgtgttgtaccttgtgcaagcgcccag acttccatctcctgtactctagaagcccttgaacccttctgggaggtcctggagagatca gttgagacccaggaggaagatgaagtgggagaagtcgtgctagaagaggaggaggaagaa ggaggctgggaggccactgcactgcccatggatccatggccactgctgcagaaccgcacc gggctggtctatgatgagaggatgatgagtcactgcaacctctgggacaatcatcaccct gagacacctcagcgcatcttacgcatcatgtgtcacctggaggaggtgggccttgcagct cgctgtctcatcctccctgctcggcctgccctggactctgagctccttacctgccacagt gctgagtacgtggagcatctccgcaccacagaaaagatgaaaacccgggatctgcaccgt gaaggtgccaactttgactccatctacatctgccccagcaccttcgcctgcgcaaagctg gccacaggcgctgcctgccgcctggtggaagctgtgctctcaggagaggttctaaatggc attgcagtagtgcgccctccaggacaccatgcggagccaaatgctgcttgtggtttctgc tttttcaattcagtagctgtagctgctcgccatgcccaggtcattgctggacgtgccctg cggatcctaatcgtggattgggatgttcatcatggtaatggaactcagcacatatttgaa gatgatcctagtgtattatacgtgtccctgcaccggtatgaccgtggcgctttcttcccc atgggggatgagggtgccagtagccaagtaggccgaaatgcaggtacaggcttcactgtc aatgtgccctggaatgggccccgcatgggtgatgctgattacctggcttcatggcatcgt ctggtacttcccatcgcctatgagtttaacccagaactggtgctgatctcagctggcttt gatgctgcacaaggggacccactggggggctgccaagtgacgccggagtgttatgcccac ctcacccacctactgatgggccttgctggtggccgtattattcttattctagagggcgga tacaatttggcatccatctctgaatctatggctgcctgcacccattccctccttggagac ccaccacccaagcttactttgctgcgaccgccacagtctggagccctggtttcaatcagt gaggtcatccaagtccatcgcaaatactggcgcagtttgcggttgatgaaaatggaagac aaggaagaatgttctagttctaggcttgtcaccaagaagttgcccccaacagccagtcct gtgtcaaccacaccgaaaggaaaggttcctgaagaaagcatgaggaagaccatagcagca ctacctgggaaagagtctactctaggccaggataaatcaaagacggccaaggctgtgctt gctcagggccagtcctcagaacaagctgctaaaggaactacactggatctggctacctca aaggagactgtgggaggagccacgacggacctgtgtgcctcggcagcagctccggaaaac ttccctaagcagaccacctccgtggaggctgtgggagaacctgagcccacgcctccaacc tcgcatacaaacaagcagagcacaggggcttcacctctgcagggagtcacggttcagcag tccctacagcttggggttctcagcactttggagctaagcagagaagcagaggaagcccat gattccgaggagggcctgctaggggaagccgctggaggtcaggacatgaacagcttgatg ctgacacaaggatttggggactttaatacccaggatgtattttatgctgtgaccccacta tcctggtgtccccatttgatggcagtctgccccatccctgcagcaggcctagatgtgtcc caaccttgtaagacctgtggaacagtccaggagaactgggtgtgtctgacttgctatcag gtgtactgcagtcgctatgtcaatgcccatatggtctgccaccatgaagcctctgaacac ccgctggtcctcagctgtgttgacctgtctacctggtgttatgtctgtcaggcttatgtc caccacgaggatctccaagacgtgaagaacgctgcccaccagaacaagtttggcgaggac ataccccactcgcactaa

DBGET integrated database retrieval system