Mus caroli (Ryukyu mouse): 110286815
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Entry
110286815 CDS
T05910
Symbol
Chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mcal01006
]
110286815 (Chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110286815 (Chm)
Prenyltransferases [BR:
mcal01006
]
Protein prenylation
Rab geranylgeranyltransferase
110286815 (Chm)
Membrane trafficking [BR:
mcal04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110286815 (Chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
110286815 (Chm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAE1_2_domI_C
GDI
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
110286815
NCBI-ProteinID:
XP_021009086
Ensembl:
MGP_CAROLIEiJ_G0033359
UniProt:
A0A6P5P4Y7
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Position
X:complement(106292071..106428351)
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AA seq
647 aa
AA seq
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MADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
EYQENSDVVTENSMWQEQILENEEAILLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQK
NHASVMSPHATEATEAACLPTAEDSLSTGSCEVPAEQSQCTGPESSPEVNDAEGGEKETQ
SDAKSSTEQSSANLPKVQDNPETPKRNVITYSQIIKDGRRFNIDLVSKLLYSRGLLIDLL
IKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYE
DHPDEYKAYEETTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSSTGDGLKATKKFLQCLG
RYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQR
IISKHFVIEDSYLSENTCSSVQYRQISRAVLITDGSVLKTDSDQQVSILTVPAEESGSFA
VRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLEGVVQKLFIPYTEIEAENEQVEKPRI
LWALYFNMRDSSDISRDCYNDLPPNVYVCSGPDCNLGNDNAVKQAETVFQQICPNEDFCP
APPNPEDIILDGDSSQQEVSESSVIPETNSETPKESTVLGDSEEPSE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatctcccttcggactttgatgtgatcgtaatagggacgggtctgcctgaa
tccatcattgcagctgcatgttcaaggagtggccagagggttctgcatgttgattcaaga
agctactatggaggaaactgggccagtttcagcttttcaggactgttgtcctggctaaag
gaataccaggaaaatagtgatgttgtgactgaaaactcaatgtggcaagaacagatactt
gaaaatgaagaagctattcttcttagtagcaaggacaaaacaattcaacatgtagaagta
ttttgttatgccagtcaggatttgcacaaagatgttgaagaagctggtgcactgcagaaa
aatcatgcttcagtgatgtccccacatgccacagaggctacagaggctgcttgccttcct
actgcagaggactcattaagcacggggagctgtgaagtacctgcagaacaaagtcagtgc
actgggccagagagttcaccagaagtaaacgatgctgaaggaggagagaaagaaactcag
agtgatgcaaaaagttcaacagaacaatcaagtgcaaatttgcctaaagtacaagacaac
ccagagacaccaaagagaaatgtaattacttactcacagattattaaagacggcagaaga
tttaacattgatttagtatcaaaacttctctattctcggggattactaattgatcttcta
atcaaatcaaatgttagtcggtatgcagagtttaaaaacattacgaggattcttgcattt
cgagaaggaactgtggaacaggtcccctgttccagagcagatgtcttcaatagcaaacaa
cttactatggtagaaaagcgaatgcttatgaaatttcttacattttgtgtggaatatgaa
gaccaccccgatgagtacaaagcatatgaggaaactacattttctgaatacttaaaaact
caaaaattaacccccaacctacaatattttgtcctgcactcaattgcaatgacatcagag
acaacaagcagtactggagatggtctcaaagctactaaaaagtttcttcagtgtcttggg
cggtatggcaacactccatttctgtttcctttgtatggccaaggagaacttccacagtgt
ttttgcagaatgtgtgctgtgtttggtggaatctattgtcttcgccattctgtacagtgc
cttgtagtggacaaagaatccagaaaatgtaaagcaattatagatcagtttggtcaaagg
ataatctctaaacatttcgttattgaagacagttacctttctgagaatacatgttccagt
gtacaatacaggcaaatttccagggcagtcctgattacagatggatcggtactaaaaacg
gattcagatcaacaggtctccattttgacagtgccagcagaagagtcaggaagttttgct
gttcgagtcattgagttatgctcttcaacaatgacatgcatgaaaggcacatacttggta
catttgacttgcatgtcttctaaaacagcaagagaagatttagaaggagtagtccagaaa
ttgtttattccatatacagaaatagaagcagaaaatgaacaggttgaaaagccaagaatt
ctatgggcactctacttcaatatgagagactcttcggatatcagcagagattgttataat
gatttaccgcccaatgtctatgtgtgctctggccctgactgtaatctaggaaatgataat
gcagtcaaacaggcggaaacagttttccagcaaatctgcccaaatgaagacttctgtcca
gccccgccaaatcctgaagatattattcttgatggagacagctcacaacaagaagtttca
gaatccagtgtcataccagaaaccaactcagagactcccaaggaaagtacagtcctagga
gactcagaagagccctctgaatag
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